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Htatip2 Gene Detail
Summary
  • Symbol
    Htatip2
  • Name
    HIV-1 Tat interactive protein 2
  • Synonyms
    TIP30
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859271
    NCBI Gene: 53415
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:49408863-49423723 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 7, 31.44 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    216 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1859271
protein coding gene Chr7:49408761-49423748 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032299
protein coding gene Chr7:50437823-50452653 (+)
A/J MGP_AJ_G0032278
protein coding gene Chr7:49675279-49690178 (+)
AKR/J MGP_AKRJ_G0032214
protein coding gene Chr7:50869309-50884205 (+)
BALB/cJ MGP_BALBcJ_G0032290
protein coding gene Chr7:49337613-49352517 (+)
C3H/HeJ MGP_C3HHeJ_G0032003
protein coding gene Chr7:51235145-51249988 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032783
protein coding gene Chr7:52742409-52757302 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029789
protein coding gene Chr7:52848132-52863109 (+)
CAST/EiJ MGP_CASTEiJ_G0031331
protein coding gene Chr7:42645947-42660918 (+)
CBA/J MGP_CBAJ_G0031968
protein coding gene Chr7:54529636-54544542 (+)
DBA/2J MGP_DBA2J_G0032125
protein coding gene Chr7:48900574-48915413 (+)
FVB/NJ MGP_FVBNJ_G0032079
protein coding gene Chr7:48833233-48848122 (+)
LP/J MGP_LPJ_G0032206
protein coding gene Chr7:51378070-51392963 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032116
protein coding gene Chr7:53623716-53638612 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032800
protein coding gene Chr7:49842945-49857845 (+)
PWK/PhJ MGP_PWKPhJ_G0031051
protein coding gene Chr7:42240362-42255361 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030892
protein coding gene Chr7:38019404-38034260 (+)
WSB/EiJ MGP_WSBEiJ_G0031449
protein coding gene Chr7:50503001-50517841 (+)



Homology
more
  • Human Ortholog
    HTATIP2, HIV-1 Tat interactive protein 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    HTATIP2, HIV-1 Tat interactive protein 2
  • Synonyms
    CC3, SDR44U1, TIP30
  • Links
    NCBI Gene ID: 10553
    neXtProt AC: NX_Q9BUP3
    UniProt: Q9BUP3

  • Chr Location
    11p15.1; chr11:20363685-20383782 (+)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Inactivation of this gene increases susceptibility to tumorigenesis.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000039745 Ensembl Gene Model | MGI Sequence Detail 14861 C57BL/6J ±  kb
    transcript ENSMUST00000207895 Ensembl | MGI Sequence Detail 1338 Not Applicable  
    polypeptide ENSMUSP00000146858 Ensembl | MGI Sequence Detail 275 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 46
      cDNA 46

      Microarray probesets 4
    Other
    Accession IDs
    less
    MGI:2142206
    References
    more
    • Summaries
      All 42
      Developmental Gene Expression 2
      Gene Ontology 6
      Phenotypes 11
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:341961 Zhang Y, et al., Hyperpolarization-activated cyclic nucleotide-gated cation channel 3 promotes HCC development in a female-biased manner. Cell Rep. 2023 Oct 31;42(10):113157

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    03/12/2024
    MGI 6.23
    The Jackson Laboratory