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Cacng6 Gene Detail
Summary
  • Symbol
    Cacng6
  • Name
    calcium channel, voltage-dependent, gamma subunit 6
  • Synonyms
    2310033H20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1859168
    NCBI Gene: 54378
Location & Maps
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  • Genetic Map
    Chromosome 7, 2.00 cM
  • Mapping Data
    2 experiments
Homology
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  • Human Ortholog
    CACNG6, calcium voltage-gated channel auxiliary subunit gamma 6
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CACNG6, calcium voltage-gated channel auxiliary subunit gamma 6
    Orthology source: HomoloGene
  • Links
    NCBI Gene ID: 59285
    neXtProt AC: NX_Q9BXT2

  • Chr Location
    19q13.4; chr19:53991149-54012666 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    5 phenotype references
Mice homozygous for disruptions in this gene display a normal phenotype.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044342 VEGA Gene Model | MGI Sequence Detail 11473 C57BL/6J ±  kb
transcript OTTMUST00000116698 VEGA | MGI Sequence Detail 1977 Not Applicable  
polypeptide OTTMUSP00000065062 VEGA | MGI Sequence Detail 260 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    115 from dbSNP Build 142
Protein
Information
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  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000004955 voltage-dependent calcium channel gamma-6 subunit
  • InterPro Domains
    IPR004031 PMP-22/EMP/MP20/Claudin superfamily
    IPR008370 Voltage-dependent calcium channel, gamma-6 subunit
    IPR008368 Voltage-dependent calcium channel, gamma subunit
Molecular
Reagents
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  • All nucleic 6
    cDNA 5
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
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MGI:1916809, MGI:2142197
References
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  • Summaries
    All 25
    Developmental Gene Expression 2
    Gene Ontology 2
    Phenotypes 5
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/12/2016
MGI 6.04
The Jackson Laboratory