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Cacng3
Gene Detail
 Symbol
Name
ID
Cacng3
calcium channel, voltage-dependent, gamma subunit 3
MGI:1859165
Feature Type protein coding gene
Genetic Map
Chromosome 7
66.81 cM, cytoband F3
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:122670492-122769393 bp, + strand
From VEGA annotation of GRCm38

  98902 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4767  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Cacng3

Human
homologs
Human Homolog CACNG3, calcium channel, voltage-dependent, gamma subunit 3
NCBI Gene ID 10368
neXtProt AC  NX_O60359
Human Chr (Location)  16p12.1; chr16:24255553-24362416 (+)  GRCh38
Alleles
and
phenotypes
All alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Male mice homozygous for disruptions in this gene have elevated cholesterol and HDL levels.
 
Gene Ontology
(GO)
classifications
All GO classifications: (15 annotations)
Process calcium ion transmembrane transport, calcium ion transport, ...
Component alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex, integral component of membrane, ...
Function calcium channel activity, voltage-gated ion channel activity
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (124)    Tissues (78)    Images (29)
Theiler Stages: 17, 19, 20, 22, 23, 28
Assay TypeResults
RNA in situ 43
In situ reporter (knock in) 36
RT-PCR 45
cDNA source data(5)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress
Molecular
reagents
All nucleic(7) cDNA(5) Primer pair(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000044341 (Evidence)
Ensembl Gene ModelENSMUSG00000066189 (Evidence)
Entrez Gene54376 (Evidence)
UniGene444212
DFCITC1647164, TC1709444
DoTSDT.55157802, DT.91331113
NIA Mouse Gene IndexU063686
Consensus CDS ProjectCCDS21816.1
International Mouse Knockout Project StatusCacng3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044341 VEGA Gene Model | MGI Sequence Detail 98902 C57BL/6J ±  kb
transcript OTTMUST00000116694 VEGA | MGI Sequence Detail 2777 Not Applicable 
polypeptide OTTMUSP00000065055 VEGA | MGI Sequence Detail 315 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(2) UniProt(3)
Polymorphisms SNPs within 2kb(666 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004031 PMP-22/EMP/MP20/Claudin
InterPro IPR008368 Voltage-dependent calcium channel, gamma subunit
Protein Ontology PR:000004952 voltage-dependent calcium channel gamma-3 subunit
References (Earliest) J:61749 Burgess DL, et al., Identification of three novel Ca(2+) channel gamma subunit genes reveals molecular diversification by tandem and chromosome duplication. Genome Res. 1999 Dec;9(12):1204-13
(Latest) J:188364 Schwenk J, et al., High-resolution proteomics unravel architecture and molecular diversity of native AMPA receptor complexes. Neuron. 2012 May 24;74(4):621-33
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory