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Cacng3
Gene Detail
Symbol

Name
ID
Cacng3
calcium channel, voltage-dependent, gamma subunit 3
MGI:1859165
Feature Type
protein coding gene
Genetic Map
Chromosome 7
66.81 cM, cytoband F3
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr7:122670492-122769393 bp, + strand
From VEGA annotation of GRCm38

  98902 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4767  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Cacng3

Human
homologs
Human Homolog CACNG3, calcium channel, voltage-dependent, gamma subunit 3
NCBI Gene ID 10368
neXtProt AC  NX_O60359
Human Chr (Location)  16p12.1; chr16:24255553-24362416 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(2) : Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Male mice homozygous for disruptions in this gene have elevated cholesterol and HDL levels.
 
Interactions
Cacng3 interacts with 103 markers (Mir7-1, Mir7-2, Mir7b, ...)
Expression
Literature Summary: (3 records)
Data Summary: Results (124)    Tissues (78)    Images (29)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 43
In situ reporter (knock in) 36
RT-PCR 45
cDNA source data(5)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(5) Primer pair(2)
Microarray probesets(2)
Other database
links
VEGA Gene ModelOTTMUSG00000044341 (Evidence)
Ensembl Gene ModelENSMUSG00000066189 (Evidence)
Entrez Gene54376 (Evidence)
UniGene444212
DFCITC1709444, TC1647164
DoTSDT.91331113, DT.55157802
NIA Mouse Gene IndexU063686
Consensus CDS ProjectCCDS21816.1
International Mouse Knockout Project StatusCacng3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000044341 VEGA Gene Model | MGI Sequence Detail 98902 C57BL/6J ±  kb
transcript OTTMUST00000116694 VEGA | MGI Sequence Detail 2777 Not Applicable 
polypeptide OTTMUSP00000065055 VEGA | MGI Sequence Detail 315 Not Applicable 

For the selected sequences
All sequences(31) RefSeq(2) UniProt(5)
Polymorphisms
SNPs within 2kb(666 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR004031 PMP-22/EMP/MP20/Claudin
InterPro IPR008368 Voltage-dependent calcium channel, gamma subunit
Protein Ontology PR:000004952 voltage-dependent calcium channel gamma-3 subunit
References
(Earliest) J:61749 Burgess DL, et al., Identification of three novel Ca(2+) channel gamma subunit genes reveals molecular diversification by tandem and chromosome duplication. Genome Res. 1999 Dec;9(12):1204-13
(Latest) J:188364 Schwenk J, et al., High-resolution proteomics unravel architecture and molecular diversity of native AMPA receptor complexes. Neuron. 2012 May 24;74(4):621-33
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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Funding Information
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory