AA914427 Gene Detail

Summary

• Symbol
  AA914427
• Name
  EST AA914427

• Feature Type
  unclassified gene
• IDs
  MGI:1858439
  NCBI Gene: 53959
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr16:17739907-17741083 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1858439	unclassified gene	Chr16:17739907-17741083 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000907	unclassified gene	Chr16:15111282-15112447 (+)
A/J	MGP_AJ_G0000883	unclassified gene	Chr16:14359041-14360206 (+)
AKR/J	MGP_AKRJ_G0000871	unclassified gene	Chr16:14917467-14918632 (+)
BALB/cJ	MGP_BALBcJ_G0000875	unclassified gene	Chr16:14512971-14514136 (+)
C3H/HeJ	MGP_C3HHeJ_G0000859	unclassified gene	Chr16:15066212-15067377 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000991	unclassified gene	Chr16:15354419-15355584 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000726	unclassified gene	Chr16:14415703-14416889 (+)
CAST/EiJ	MGP_CASTEiJ_G0000851	unclassified gene	Chr16:14984561-14985722 (+)
CBA/J	MGP_CBAJ_G0000851	unclassified gene	Chr16:16024527-16025692 (+)
DBA/2J	MGP_DBA2J_G0000855	unclassified gene	Chr16:14270289-14271454 (+)
FVB/NJ	MGP_FVBNJ_G0000867	unclassified gene	Chr16:14322238-14323403 (+)
LP/J	MGP_LPJ_G0000910	unclassified gene	Chr16:14893736-14894901 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000859	unclassified gene	Chr16:15705657-15706822 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000985	unclassified gene	Chr16:14863466-14864631 (+)
PWK/PhJ	MGP_PWKPhJ_G0000806	unclassified gene	Chr16:14529705-14530869 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000778	unclassified gene	Chr16:14833441-14834600 (+)
WSB/EiJ	MGP_WSBEiJ_G0000859	unclassified gene	Chr16:14847128-14848293 (+)

Homology

• Gene Tree
  AA914427
  

Human Diseases

• References
  5 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  98 phenotype references
  

• All Mutations and Alleles
  11
• Endonuclease-mediated
  2
• Targeted
  9
• Genomic Mutations
  11 involving AA914427
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  24
• RefSeq
  1

• Ensembl
  ENSMUSG00000103149 (Evidence)
• NCBI Gene
  53959

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103149	Ensembl Gene Model | MGI Sequence Detail	1177	C57BL/6J
transcript	NR_188871	RefSeq | MGI Sequence Detail	1170	C57BL/6

Molecular
Reagents

• All nucleic 3

  Genomic 1

  cDNA 2

  
  

  Microarray probesets 1

References

• Summaries
  All 106

  Diseases 5

  Phenotypes 98
• Earliest
  J:57757 Lindsay EA, et al., Congenital heart disease in mice deficient for the DiGeorge syndrome region [see comments]. Nature. 1999 Sep 23;401(6751):379-83
• Latest
  J:346702 Colombi I, et al., Heterogeneous subpopulations of GABA(A)R-responding neurons coexist across neuronal network scales and developmental stages in health and disease. iScience. 2024 Apr 19;27(4):109438

TSS for AA914427:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr137346	Chr16:17739905-17739940 (+)	16 bp