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Tomm40
Gene Detail
Symbol

Name
ID
Tomm40
translocase of outer mitochondrial membrane 40 homolog (yeast)
MGI:1858259
Synonyms
Tom40
Feature Type
protein coding gene
Genetic Map
Chromosome 7
9.94 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:19701313-19715438 bp, - strand
From VEGA annotation of GRCm38

  14126 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:101105  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Gene Tree: Tomm40

Human
homologs
Human Homolog TOMM40, translocase of outer mitochondrial membrane 40 homolog (yeast)
NCBI Gene ID 10452
neXtProt AC  NX_O96008
Human Synonyms  C19orf1, D19S1177E, PEREC1, PER-EC1, TOM40
Human Chr (Location)  19q13; chr19:44891220-44903689 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(23) : Gene trapped(23)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Tomm40 interacts with 46 markers (Mir18, Mir26a-1, Mir26a-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (22 annotations)
Process ion transport, protein targeting to mitochondrion, ...
Component cytoplasm, extracellular vesicular exosome, ...
Function porin activity, protein transmembrane transporter activity
External Resources: FuncBase
Expression
Literature Summary: (2 records)
Data Summary: Results (1)    Tissues (1)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 1
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(12) cDNA(12)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000038241 (Evidence)
Ensembl Gene ModelENSMUSG00000002984 (Evidence)
Entrez Gene53333 (Evidence)
DFCITC1628898, TC1594697, TC1575502
DoTSDT.103584426, DT.101372672, DT.101137807, DT.535058, DT.99853973
NIA Mouse Gene IndexU007772, U028238
Consensus CDS ProjectCCDS52062.1
International Mouse Knockout Project StatusTomm40
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000038241 VEGA Gene Model | MGI Sequence Detail 14126 C57BL/6J ±  kb
transcript OTTMUST00000098467 VEGA | MGI Sequence Detail 1577 Not Applicable 
polypeptide OTTMUSP00000055355 VEGA | MGI Sequence Detail 361 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(134 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR027246 Eukaryotic porin/Tom40
InterPro IPR023614 Porin domain
Protein Ontology PR:000016536 mitochondrial import receptor subunit TOM40
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(35)
Other
accession IDs
MGI:2142249

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
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last database update
12/09/2014
MGI 5.20
The Jackson Laboratory