Naip3-ps3 Pseudogene Detail

Summary

• Symbol
  Naip3-ps3
• Name
  NLR family, apoptosis inhibitory protein 3, pseudogene 3
• Synonyms
  Birc1c-ps3

• Feature Type
  pseudogene
• IDs
  MGI:1858255
  NCBI Gene: 53900
• Member of
  Naipc cluster
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr13:100411706-100412442 bp

  From MGI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 13, Syntenic
• Mapping Data
  5 experiments

Strain
Comparison

• SNPs within 2kb
  2 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1858255	pseudogene	Chr13:100411706-100412442 (.)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  1 phenotype reference
  

• All Mutations and Alleles
  1
• Targeted
  1
• Genomic Mutations
  1 involving Naip3-ps3
• Find Mice (IMSR)
  0 strains or lines available

Sequences &
Gene Models

• All Sequences
  4
• RefSeq
  1

• NCBI Gene
  53900

Representative Sequences			Length	Strain/Species
genomic	AF189167	GenBank | ENA | DDBJ | MGI Sequence Detail	737	Not Specified

Molecular
Reagents

• All nucleic 3

  Genomic 3

References

• Summaries
  All 7

  Phenotypes 1
• Earliest
  J:61136 Growney JD, et al., Evolutionary divergence of the mouse and human Lgn1/SMA repeat structures. Genomics. 2000 Feb 15;64(1):62-81
• Latest
  J:222114 Allam R, et al., Epithelial NAIPs protect against colonic tumorigenesis. J Exp Med. 2015 Mar 9;212(3):369-83