Sept9
Gene Detail

Symbol Name ID

Sept9 septin 9 MGI:1858222

Synonyms

Msf, MSF1, PNUTL4, Sint1, SL3-3 integration site 1

Feature Type

protein coding gene

Genetic Map

Chromosome 11

82.61 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)

Sequence Map

Chr11:117199661-117362325 bp, + strand From VEGA annotation of GRCm38   162665 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:90949  Vertebrate Homology Class
1 mouse; 1 rat; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Protein SuperFamily: septin
Gene Tree: Sept9

Alleles and phenotypes

All alleles(267) : Targeted(2) Gene trapped(265)

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	cell cycle, cell division
Component	cytoplasm, cytoskeleton
Function	GTP binding, nucleotide binding

External Resources: FuncBase

Expression

Literature Summary: (3 records)
Data Summary: Results (24)    Tissues (12)   
Theiler Stages: 10, 18, 23, 25, 28

Assay Type	Results
Northern blot	24

cDNA source data(9)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(10) Genomic(1) cDNA(9)
Microarray probesets(3)

Other database links

VEGA Gene Model	OTTMUSG00000003788 (Evidence)
Ensembl Gene Model	ENSMUSG00000059248 (Evidence)
Entrez Gene	53860 (Evidence)
DFCI	TC1574203, TC1674571
DoTS	DT.101147106, DT.101335815, DT.101735780, DT.110506412, DT.535253, DT.97367011, DT.97375851, DT.97408179
NIA Mouse Gene Index	U013591
Consensus CDS Project	CCDS25684.1, CCDS48990.1, CCDS48991.1
International Mouse Knockout Project Status	Sept9

Sequences

Length	Strain/Species
genomic	OTTMUSG00000003788	VEGA Gene Model | MGI Sequence Detail	162665	C57BL/6J
transcript	OTTMUST00000008318	VEGA | MGI Sequence Detail	3616	Not Applicable
polypeptide	OTTMUSP00000004043	VEGA | MGI Sequence Detail	583	Not Applicable

All sequences(84) RefSeq(8) UniProt(5)

Polymorphisms

SNPs(131 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR000038	Cell division protein GTP binding
InterPro	IPR027417	P-loop containing nucleoside triphosphate hydrolase
InterPro	IPR016491	Septin
InterPro	IPR005225	Small GTP-binding protein domain
Protein Ontology	PR:000014661	septin-9

References

(Earliest) J:93290 Araki K, et al., Exchangeable gene trap using the Cre/mutated lox system. Cell Mol Biol (Noisy-le-grand). 1999 Jul;45(5):737-50
(Latest) J:186260 Yoshida A, et al., Localization of septin proteins in the mouse cochlea. Hear Res. 2012 Jul;289(1-2):40-51
All references(40)