About   Help   FAQ
Rcan3 Gene Detail
Summary
  • Symbol
    Rcan3
  • Name
    regulator of calcineurin 3
  • Synonyms
    Csp3, Dscr1l2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1858220
    NCBI Gene: 53902
  • Gene Overview
    MyGene.info: RCAN3
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:135412308-135433853 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 4, 67.59 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1858220
protein coding gene Chr4:135412308-135433870 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028943
protein coding gene Chr4:137846575-137871554 (-)
A/J MGP_AJ_G0028902
protein coding gene Chr4:132030531-132052025 (-)
AKR/J MGP_AKRJ_G0028854
protein coding gene Chr4:135833522-135857710 (-)
BALB/cJ MGP_BALBcJ_G0028926
protein coding gene Chr4:132683725-132705269 (-)
C3H/HeJ MGP_C3HHeJ_G0028640
protein coding gene Chr4:136104593-136126003 (-)
C57BL/6NJ MGP_C57BL6NJ_G0029367
protein coding gene Chr4:142782279-142803780 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026638
protein coding gene Chr4:125083903-125106157 (-)
CAST/EiJ MGP_CASTEiJ_G0028072
protein coding gene Chr4:134221275-134244754 (-)
CBA/J MGP_CBAJ_G0028605
protein coding gene Chr4:146670998-146695480 (-)
DBA/2J MGP_DBA2J_G0028754
protein coding gene Chr4:132447820-132469363 (-)
FVB/NJ MGP_FVBNJ_G0028721
protein coding gene Chr4:131366874-131388223 (-)
LP/J MGP_LPJ_G0028853
protein coding gene Chr4:137956531-137978838 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028747
protein coding gene Chr4:150990776-151013121 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0029405
protein coding gene Chr4:136273251-136294695 (-)
PWK/PhJ MGP_PWKPhJ_G0027792
protein coding gene Chr4:129217705-129239280 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027618
protein coding gene Chr4:132104860-132126063 (-)
WSB/EiJ MGP_WSBEiJ_G0028150
protein coding gene Chr4:136454813-136477389 (-)



Homology
more
  • Human Ortholog
    RCAN3, RCAN family member 3
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RCAN3, RCAN family member 3
    Orthology source: HomoloGene, HGNC
  • Synonyms
    DSCR1L2, hRCN3, MCIP3, RCN3
  • Links
    NCBI Gene ID: 11123
    neXtProt AC: NX_Q9UKA8
    UniProt: Q9UKA8

  • Chr Location
    1p36.11; chr1:24502351-24537020 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000059713 Ensembl Gene Model | MGI Sequence Detail 21546 C57BL/6J ±  kb
transcript ENSMUST00000030606 Ensembl | MGI Sequence Detail 5111 Not Applicable  
polypeptide ENSMUSP00000030606 Ensembl | MGI Sequence Detail 239 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 91
    cDNA 87
    Primer pair 3
    Other 1

    Microarray probesets 5
Other
Accession IDs
less
MGI:2140477
References
more
  • Summaries
    All 36
    Developmental Gene Expression 5
    Gene Ontology 4
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:238260 Liu TY, et al., Muscle developmental defects in heterogeneous nuclear Ribonucleoprotein A1 knockout mice. Open Biol. 2017 Jan;7(1)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
11/13/2018
MGI 6.13
The Jackson Laboratory