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Stx7 Gene Detail
Summary
  • Symbol
    Stx7
  • Name
    syntaxin 7
  • Feature Type
    protein coding gene
  • IDs
    MGI:1858210
    NCBI Gene: 53331
  • Alliance
  • Transcription Start Sites
    6 TSS
Location &
Maps
more
  • Sequence Map
    Chr10:24025182-24064859 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 10, 11.45 cM, cytoband A3
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    182 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1858210
protein coding gene Chr10:24025182-24066120 (+)
129S1/SvImJ MGP_129S1SvImJ_G0017090
protein coding gene Chr10:22103568-22145467 (+)
A/J MGP_AJ_G0017067
protein coding gene Chr10:21455150-21496037 (+)
AKR/J MGP_AKRJ_G0017027
protein coding gene Chr10:21804948-21844975 (+)
BALB/cJ MGP_BALBcJ_G0017030
protein coding gene Chr10:21541228-21581694 (+)
C3H/HeJ MGP_C3HHeJ_G0016850
protein coding gene Chr10:22019931-22061050 (+)
C57BL/6NJ MGP_C57BL6NJ_G0017488
protein coding gene Chr10:22794911-22836639 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0015186
protein coding gene Chr10:20173306-20215262 (+)
CAST/EiJ MGP_CASTEiJ_G0016429
protein coding gene Chr10:21938749-21981869 (+)
CBA/J MGP_CBAJ_G0016824
protein coding gene Chr10:23818781-23865987 (+)
DBA/2J MGP_DBA2J_G0016929
protein coding gene Chr10:21191104-21232420 (+)
FVB/NJ MGP_FVBNJ_G0016924
protein coding gene Chr10:20908916-20948158 (+)
LP/J MGP_LPJ_G0017006
protein coding gene Chr10:22108335-22150346 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016954
protein coding gene Chr10:23934987-23980445 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017524
protein coding gene Chr10:21677469-21717681 (+)
PWK/PhJ MGP_PWKPhJ_G0016211
protein coding gene Chr10:20969539-21010539 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015995
protein coding gene Chr10:21487306-21527838 (+)
WSB/EiJ MGP_WSBEiJ_G0016492
protein coding gene Chr10:21782520-21823837 (+)



Homology
more
  • Human Ortholog
    STX7, syntaxin 7
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    STX7, syntaxin 7
  • Links
    NCBI Gene ID: 8417
    neXtProt AC: NX_O15400
    UniProt: O15400

  • Chr Location
    6q23.2; chr6:132445867-132513472 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 53331 NCBI Gene Model | MGI Sequence Detail 39678 C57BL/6J ±  kb
    transcript NM_016797 RefSeq | MGI Sequence Detail 2516 C57BL/6  
    polypeptide O70439 UniProt | EBI | MGI Sequence Detail 261 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 126
      cDNA 126

      Microarray probesets 5
    Other
    Accession IDs
    less
    MGI:2143566, MGI:2143572, MGI:2143805
    References
    more
    • Summaries
      All 56
      Developmental Gene Expression 5
      Gene Ontology 11
      Phenotypes 11
    • Earliest
      J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
    • Latest
      J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    last database update
    03/12/2024
    MGI 6.23
    The Jackson Laboratory