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Stx7
Gene Detail
 Symbol
Name
ID
Stx7
syntaxin 7
MGI:1858210
Feature Type protein coding gene
Genetic Map
Chromosome 10
11.45 cM, cytoband A3
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr10:24149317-24188959 bp, + strand
From NCBI annotation of GRCm38

  39643 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:37823  Vertebrate Homology Class
1 human; 1 mouse; 2 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Stx7

Human
homologs
Human Homolog STX7, syntaxin 7
NCBI Gene ID 8417
neXtProt AC  NX_O15400
Human Chr (Location)  6q23.1; chr6:132457524-132513198 (-)  GRCh38
Alleles
and
phenotypes
All alleles(2) : Gene trapped(2)
Incidental mutations (data from Mutagenetix , APF )
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process intracellular protein transport, synaptic vesicle exocytosis, ...
Component endosome, extracellular vesicular exosome, ...
Function protein binding, protein complex binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (106)    Tissues (13)    Images (23)
Theiler Stages: 23
Assay TypeResults
RNA in situ 106
cDNA source data(125)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(125) cDNA(125)
Microarray probesets(5)
Other database
links
Ensembl Gene ModelENSMUSG00000019998 (Evidence)
Entrez Gene53331 (Evidence)
UniGene248042
DFCITC1572634, TC1771357
DoTSDT.110627519, DT.491416, DT.94217381, DT.97408157
NIA Mouse Gene IndexU011346
PDB1GL2
Consensus CDS ProjectCCDS23749.1
International Mouse Knockout Project StatusStx7
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 53331 NCBI Gene Model | MGI Sequence Detail 39643 C57BL/6J ±  kb
transcript NM_016797 RefSeq | MGI Sequence Detail 2500 C57BL/6 
polypeptide O70439 UniProt | EBI | MGI Sequence Detail 261 Not Applicable 

For the selected sequences
All sequences(57) RefSeq(6) UniProt(4)
Polymorphisms SNPs within 2kb(183 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR006012 Syntaxin/epimorphin, conserved site
InterPro IPR006011 Syntaxin, N-terminal
InterPro IPR000727 Target SNARE coiled-coil domain
InterPro IPR010989 t-SNARE
Protein Ontology PR:000015799 syntaxin-7
Graphical View of Protein Domain Structure
References (Earliest) J:75403 Nakamura N, et al., Syntaxin 7 mediates endocytic trafficking to late endosomes. J Biol Chem. 2000 Mar 3;275(9):6523-9
(Latest) J:206800 Pirooz SD, et al., UVRAG is required for virus entry through combinatorial interaction with the class C-Vps complex and SNAREs. Proc Natl Acad Sci U S A. 2014 Feb 18;111(7):2716-21
All references(45)
Other
accession IDs
MGI:2143566, MGI:2143572, MGI:2143805

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory