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Clasrp Gene Detail
Summary
  • Symbol
    Clasrp
  • Name
    CLK4-associating serine/arginine rich protein
  • Synonyms
    Sfrs16, Srsf16, SWAP2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1855695
    NCBI Gene: 53609
  • Gene Overview
    MyGene.info: CLASRP
Location & Maps
more
  • Sequence Map
    Chr7:19581035-19604486 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      23452 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 9.93 cM, cytoband A2
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    CLASRP, CLK4 associating serine/arginine rich protein
  • Vertebrate Orthologs
    2
  • Human Ortholog
    CLASRP, CLK4 associating serine/arginine rich protein
    Orthology source: HGNC
  • Synonyms
    CLASP, SFRS16, SWAP2
  • Links
    NCBI Gene ID: 11129
    neXtProt AC: NX_Q8N2M8

  • Chr Location
    19q13.3; chr19:45039040-45070956 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    32
  • Gene trapped
    30
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000059257 VEGA Gene Model | MGI Sequence Detail 23452 C57BL/6J ±  kb
transcript OTTMUST00000145425 VEGA | MGI Sequence Detail 2180 Not Applicable  
polypeptide OTTMUSP00000075767 VEGA | MGI Sequence Detail 668 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    152 from dbSNP Build 142
Protein
Information
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  • UniProt
    5 Sequences
  • Protein Ontology
    PR:000014754 CLK4-associating serine/arginine rich protein
  • InterPro Domains
    IPR019147 Suppressor of white apricot N-terminal domain
Molecular
Reagents
less
  • All nucleic 54
    cDNA 54

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/19/2016
MGI 6.04
The Jackson Laboratory