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Clasrp Gene Detail
Summary
  • Symbol
    Clasrp
  • Name
    CLK4-associating serine/arginine rich protein
  • Synonyms
    Sfrs16, Srsf16, SWAP2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1855695
    NCBI Gene: 53609
  • Gene Overview
    MyGene.info: CLASRP
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:19581035-19604486 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 9.93 cM, cytoband A2
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    152 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1855695
protein coding gene Chr7:19581035-19604517 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031786
protein coding gene Chr7:17609939-17637099 (-)
A/J MGP_AJ_G0031762
protein coding gene Chr7:17228474-17253924 (-)
AKR/J MGP_AKRJ_G0031688
protein coding gene Chr7:17706814-17733752 (-)
BALB/cJ MGP_BALBcJ_G0031767
protein coding gene Chr7:17436098-17459405 (-)
C3H/HeJ MGP_C3HHeJ_G0031489
protein coding gene Chr7:17970210-17996190 (-)
C57BL/6NJ MGP_C57BL6NJ_G0032233
protein coding gene Chr7:18476659-18501582 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029299
protein coding gene Chr7:18876818-18900391 (-)
CAST/EiJ MGP_CASTEiJ_G0030833
protein coding gene Chr7:14416289-14431738 (-)
CBA/J MGP_CBAJ_G0031451
protein coding gene Chr7:19151385-19177653 (-)
DBA/2J MGP_DBA2J_G0031606
protein coding gene Chr7:17181169-17204204 (-)
FVB/NJ MGP_FVBNJ_G0031558
protein coding gene Chr7:17042136-17067602 (-)
LP/J MGP_LPJ_G0031689
protein coding gene Chr7:17925034-17953966 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031594
protein coding gene Chr7:18986021-19008950 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0032261
protein coding gene Chr7:17313783-17338088 (-)
PWK/PhJ MGP_PWKPhJ_G0030556
protein coding gene Chr7:14277261-14301203 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030383
protein coding gene Chr7:12020519-12044383 (-)
WSB/EiJ MGP_WSBEiJ_G0030932
protein coding gene Chr7:17535016-17559492 (-)



Homology
more
  • Human Ortholog
    CLASRP, CLK4 associating serine/arginine rich protein
  • Vertebrate Orthologs
    2
  • Human Ortholog
    CLASRP, CLK4 associating serine/arginine rich protein
    Orthology source: HGNC
  • Synonyms
    CLASP, SFRS16, SWAP2
  • Links
    NCBI Gene ID: 11129
    neXtProt AC: NX_Q8N2M8
    UniProt: Q8N2M8

  • Chr Location
    19q13.32; chr19:45039040-45070956 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000061028 Ensembl Gene Model | MGI Sequence Detail 23452 C57BL/6J ±  kb
transcript ENSMUST00000086041 Ensembl | MGI Sequence Detail 2180 Not Applicable  
polypeptide ENSMUSP00000083205 Ensembl | MGI Sequence Detail 668 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 56
    cDNA 56

    Microarray probesets 3
References
more
  • Summaries
    All 30
    Developmental Gene Expression 1
    Gene Ontology 1
    Phenotypes 6
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory