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Nr1h2-ps Pseudogene Detail
Summary
  • Symbol
    Nr1h2-ps
  • Name
    nuclear receptor subfamily 1, group H, member 2, pseudogene
  • Synonyms
    LXR-beta pseudogene, nuclear oxysterol receptor, psiLXR beta
  • Feature Type
    pseudogene
  • IDs
    MGI:1354955
    NCBI Gene: 50800
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr9:74364601-74365017 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 41.19 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    26 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354955
pseudogene Chr9:74364586-74365063 (-)
129S1/SvImJ MGP_129S1SvImJ_G0014168
pseudogene Chr9:74619993-74620470 (-)
A/J MGP_AJ_G0014185
pseudogene Chr9:72025644-72026121 (-)
AKR/J MGP_AKRJ_G0014111
pseudogene Chr9:73743966-73744443 (-)
BALB/cJ MGP_BALBcJ_G0014136
pseudogene Chr9:71706529-71707006 (-)
C3H/HeJ MGP_C3HHeJ_G0013967
pseudogene Chr9:74223851-74224328 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014579
pseudogene Chr9:76598740-76599217 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012415
pseudogene Chr9:71412322-71412801 (-)
CAST/EiJ MGP_CASTEiJ_G0013624
pseudogene Chr9:74558461-74558934 (-)
CBA/J MGP_CBAJ_G0013949
pseudogene Chr9:79232621-79233098 (-)
DBA/2J MGP_DBA2J_G0014033
pseudogene Chr9:71701924-71702401 (-)
FVB/NJ MGP_FVBNJ_G0014032
pseudogene Chr9:71022811-71023288 (-)
LP/J MGP_LPJ_G0014116
pseudogene Chr9:74881414-74881891 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0014062
pseudogene Chr9:80372578-80373055 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014552
pseudogene Chr9:73909743-73910220 (-)
PWK/PhJ MGP_PWKPhJ_G0013440
pseudogene Chr9:71990892-71991368 (-)
SPRET/EiJ MGP_SPRETEiJ_G0013225
pseudogene Chr9:74152460-74152933 (-)
WSB/EiJ MGP_WSBEiJ_G0013683
pseudogene Chr9:73826948-73827425 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic 50800 NCBI Gene Model | MGI Sequence Detail 417 C57BL/6J ±  kb
For the selected sequence
References
more
  • Summaries
    All 11
    Phenotypes 2
  • Earliest
    J:60322 Alberti S, et al., Structural characterisation of the mouse nuclear oxysterol receptor genes LXRalpha and LXRbeta. Gene. 2000 Feb 8;243(1-2):93-103
  • Latest
    J:76860 Joseph SB, et al., Synthetic LXR ligand inhibits the development of atherosclerosis in mice. Proc Natl Acad Sci U S A. 2002 May 28;99(11):7604-9

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
03/31/2020
MGI 6.15
The Jackson Laboratory