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Atp9b Gene Detail
Summary
  • Symbol
    Atp9b
  • Name
    ATPase, class II, type 9B
  • Synonyms
    IIb
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354757
    NCBI Gene: 50771
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:80734141-80934058 bp, - strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 53.90 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1048 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354757
protein coding gene Chr18:80734141-80934079 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024598
protein coding gene Chr18:81660221-81869587 (-)
A/J MGP_AJ_G0024565
protein coding gene Chr18:78091064-78289170 (-)
AKR/J MGP_AKRJ_G0024536
protein coding gene Chr18:80421493-80628340 (-)
BALB/cJ MGP_BALBcJ_G0024563
protein coding gene Chr18:78275703-78472588 (-)
C3H/HeJ MGP_C3HHeJ_G0024332
protein coding gene Chr18:80508317-80712571 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025010
protein coding gene Chr18:83747523-83950580 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0022441
protein coding gene Chr18:76939094-77128544 (-)
CAST/EiJ MGP_CASTEiJ_G0023805
protein coding gene Chr18:80845681-81050511 (-)
CBA/J MGP_CBAJ_G0024302
protein coding gene Chr18:86794594-87014380 (-)
DBA/2J MGP_DBA2J_G0024432
protein coding gene Chr18:77641856-77839292 (-)
FVB/NJ MGP_FVBNJ_G0024398
protein coding gene Chr18:76955104-77150727 (-)
LP/J MGP_LPJ_G0024516
protein coding gene Chr18:81526452-81732566 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0024428
protein coding gene Chr18:88042983-88274636 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025059
protein coding gene Chr18:80569709-80778666 (-)
PWK/PhJ MGP_PWKPhJ_G0023550
protein coding gene Chr18:78038535-78240716 (-)
SPRET/EiJ MGP_SPRETEiJ_G0023356
protein coding gene Chr18:80747279-80957426 (-)
WSB/EiJ MGP_WSBEiJ_G0023867
protein coding gene Chr18:80519087-80731649 (-)



Homology
more
  • Human Ortholog
    ATP9B, ATPase phospholipid transporting 9B (putative)
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ATP9B, ATPase phospholipid transporting 9B (putative)
    Orthology source: HomoloGene, HGNC
  • Synonyms
    ATPASEP, ATPIIB, hMMR1, HUSSY-20, NEO1L
  • Links
    NCBI Gene ID: 374868
    neXtProt AC: NX_O43861
    UniProt: O43861

  • Chr Location
    18q23; chr18:79069275-79378391 (+)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 21915
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: ATP9B
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000024566 Ensembl Gene Model | MGI Sequence Detail 199918 C57BL/6J ±  kb
transcript ENSMUST00000091790 Ensembl | MGI Sequence Detail 5357 Not Applicable  
polypeptide ENSMUSP00000089394 Ensembl | MGI Sequence Detail 1146 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 16
    Genomic 2
    cDNA 14

    Microarray probesets 6
Other
Accession IDs
less
MGI:2147185
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 3
  • Earliest
    J:59384 Halleck MS, et al., Differential expression of putative transbilayer amphipath transporters. Physiol Genomics. 1999 Nov 11;1(3):139-50
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
03/19/2019
MGI 6.13
The Jackson Laboratory