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Synrg Gene Detail
Summary
  • Symbol
    Synrg
  • Name
    synergin, gamma
  • Synonyms
    Ap1gbp1, L71-5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354742
    NCBI Gene: 217030
  • Gene Overview
    MyGene.info: SYNRG
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:83964428-84044578 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 51.25 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    341 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354742
protein coding gene Chr11:83964377-84044578 (.)
129S1/SvImJ MGP_129S1SvImJ_G0018864
protein coding gene Chr11:85356557-85441031 (+)
A/J MGP_AJ_G0018831
protein coding gene Chr11:82115511-82196107 (+)
AKR/J MGP_AKRJ_G0018801
protein coding gene Chr11:84536672-84616425 (+)
BALB/cJ MGP_BALBcJ_G0018804
protein coding gene Chr11:82497839-82580893 (+)
C3H/HeJ MGP_C3HHeJ_G0018618
protein coding gene Chr11:84589441-84670593 (+)
C57BL/6NJ MGP_C57BL6NJ_G0019256
protein coding gene Chr11:87944283-88028162 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0016889
protein coding gene Chr11:79205077-79287637 (+)
CAST/EiJ MGP_CASTEiJ_G0018173
protein coding gene Chr11:85220041-85306378 (+)
CBA/J MGP_CBAJ_G0018589
protein coding gene Chr11:91722202-91805782 (+)
DBA/2J MGP_DBA2J_G0018697
protein coding gene Chr11:81692627-81773587 (+)
FVB/NJ MGP_FVBNJ_G0018686
protein coding gene Chr11:81162758-81244853 (+)
LP/J MGP_LPJ_G0018767
protein coding gene Chr11:85893354-85974680 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0018713
protein coding gene Chr11:91867275-91952025 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0019296
protein coding gene Chr11:84818994-84899791 (+)
PWK/PhJ MGP_PWKPhJ_G0017942
protein coding gene Chr11:82446915-82528129 (+)
SPRET/EiJ MGP_SPRETEiJ_G0017734
protein coding gene Chr11:84349290-84437494 (+)
WSB/EiJ MGP_WSBEiJ_G0018224
protein coding gene Chr11:84661588-84744052 (+)



Homology
more
  • Human Ortholog
    SYNRG, synergin gamma
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SYNRG, synergin gamma
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AP1GBP1, SYNG
  • Links
    NCBI Gene ID: 11276
    neXtProt AC: NX_Q9UMZ2
    UniProt: Q9UMZ2

  • Chr Location
    17q12; chr17:37514797-37613637 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 105680
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SYNRG
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000034940 Ensembl Gene Model | MGI Sequence Detail 80151 C57BL/6J ±  kb
transcript ENSMUST00000183456 Ensembl | MGI Sequence Detail 3990 Not Applicable  
polypeptide ENSMUSP00000138969 Ensembl | MGI Sequence Detail 1329 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 13
    Genomic 1
    cDNA 12

    Microarray probesets 6
Other
Accession IDs
less
MGI:2144616
References
more
  • Summaries
    All 41
    Gene Ontology 2
    Phenotypes 16
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory