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Synrg Gene Detail
Summary
  • Symbol
    Synrg
  • Name
    synergin, gamma
  • Synonyms
    Ap1gbp1, L71-5
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354742
    NCBI Gene: 217030
  • Gene Overview
    MyGene.info: SYNRG
  • Alliance
Location & Maps
more
  • Sequence Map
    Chr11:83964428-84044578 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      80151 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 11, 51.25 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    SYNRG, synergin gamma
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SYNRG, synergin gamma
    Orthology source: HomoloGene, HGNC
  • Synonyms
    AP1GBP1, SYNG
  • Links
    NCBI Gene ID: 11276
    neXtProt AC: NX_Q9UMZ2
    UniProt: Q9UMZ2

  • Chr Location
    17q12; chr17:37514797-37613637 (-)  GRCh38.p7

  • HomoloGene
    Vertebrate Homology Class 105680
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: SYNRG
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    16 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000000989 VEGA Gene Model | MGI Sequence Detail 80151 C57BL/6J ±  kb
transcript OTTMUST00000117011 VEGA | MGI Sequence Detail 3990 Not Applicable  
polypeptide OTTMUSP00000065453 VEGA | MGI Sequence Detail 1329 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    341 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 12
    cDNA 12

    Microarray probesets 6
Other
Accession IDs
less
MGI:2144616
References
more
  • Summaries
    All 41
    Gene Ontology 2
    Phenotypes 16
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:174216 Terzian T, et al., Rpl27a mutation in the sooty foot ataxia mouse phenocopies high p53 mouse models. J Pathol. 2011 Aug;224(4):540-52

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/17/2017
MGI 6.10
The Jackson Laboratory