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Sh3bgr Gene Detail
Summary
  • Symbol
    Sh3bgr
  • Name
    SH3-binding domain glutamic acid-rich protein
  • Synonyms
    5430437A18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354740
    NCBI Gene: 50795
  • Gene Overview
    MyGene.info: SH3BGR
  • Alliance
  • Transcription Start Sites
    12 TSS
Location &
Maps
more
  • Sequence Map
    Chr16:96200470-96228933 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 16, 56.86 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    152 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354740
protein coding gene Chr16:96185798-96228937 (.)
129S1/SvImJ MGP_129S1SvImJ_G0023083
protein coding gene Chr16:97571405-97599648 (+)
A/J MGP_AJ_G0023051
protein coding gene Chr16:92940713-92968888 (+)
AKR/J MGP_AKRJ_G0023021
protein coding gene Chr16:95811754-95840005 (+)
BALB/cJ MGP_BALBcJ_G0023053
protein coding gene Chr16:93500284-93528398 (+)
C3H/HeJ MGP_C3HHeJ_G0022814
protein coding gene Chr16:96333104-96361330 (+)
C57BL/6NJ MGP_C57BL6NJ_G0023500
protein coding gene Chr16:100671057-100699161 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021002
protein coding gene Chr16:90800537-90826756 (+)
CAST/EiJ MGP_CASTEiJ_G0022333
protein coding gene Chr16:97128615-97165736 (+)
CBA/J MGP_CBAJ_G0022783
protein coding gene Chr16:105006108-105034543 (+)
DBA/2J MGP_DBA2J_G0022917
protein coding gene Chr16:92828094-92857001 (+)
FVB/NJ MGP_FVBNJ_G0022891
protein coding gene Chr16:92002312-92035280 (+)
LP/J MGP_LPJ_G0022987
protein coding gene Chr16:97202649-97234868 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0022912
protein coding gene Chr16:109230048-109258695 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0023518
protein coding gene Chr16:96346997-96375597 (+)
PWK/PhJ MGP_PWKPhJ_G0022078
protein coding gene Chr16:93125812-93154972 (+)
SPRET/EiJ MGP_SPRETEiJ_G0021908
protein coding gene Chr16:95891147-95918851 (+)
WSB/EiJ MGP_WSBEiJ_G0022384
protein coding gene Chr16:96608231-96636322 (+)



Homology
more
  • Human Ortholog
    SH3BGR, SH3 domain binding glutamate rich protein
  • Vertebrate Orthologs
    5
  • Human Ortholog
    SH3BGR, SH3 domain binding glutamate rich protein
    Orthology source: HGNC
  • Synonyms
    21-GARP
  • Links
    NCBI Gene ID: 6450
    neXtProt AC: NX_P55822
    UniProt: P55822

  • Chr Location
    21q22.2; chr21:39445865-39515506 (+)  GRCh38.p7

Human Diseases
less
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    27 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040666 Ensembl Gene Model | MGI Sequence Detail 28464 C57BL/6J ±  kb
transcript ENSMUST00000233945 Ensembl | MGI Sequence Detail 1121 Not Applicable  
polypeptide ENSMUSP00000156748 Ensembl | MGI Sequence Detail 299 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 30
    Primer pair 2
    Other 1

    Microarray probesets 7
Other
Accession IDs
less
MGI:1918665
References
more
  • Summaries
    All 55
    Developmental Gene Expression 6
    Diseases 3
    Gene Ontology 1
    Phenotypes 27
  • Earliest
    J:60424 Egeo A, et al., Developmental expression of the SH3BGR gene, mapping to the Down syndrome heart critical region. Mech Dev. 2000 Feb;90(2):313-6
  • Latest
    J:263025 Zoupa M, et al., Gene expression profiling in the developing secondary palate in the absence of Tbx1 function. BMC Genomics. 2018 Jun 4;19(1):429

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory