About   Help   FAQ
Igbp1b Gene Detail
Summary
  • Symbol
    Igbp1b
  • Name
    immunoglobulin (CD79A) binding protein 1b
  • Synonyms
    alpha4-b
  • Feature Type
    protein coding gene
  • IDs
    MGI:1354380
    NCBI Gene: 50540
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:138657089-138658444 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 6, 69.23 cM, cytoband G1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    42 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1354380
protein coding gene Chr6:138657089-138658544 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031442
protein coding gene Chr6:143264962-143266417 (-)
A/J MGP_AJ_G0031417
protein coding gene Chr6:137612774-137614230 (-)
AKR/J MGP_AKRJ_G0031345
protein coding gene Chr6:141793756-141795212 (-)
BALB/cJ MGP_BALBcJ_G0031424
protein coding gene Chr6:137466714-137468170 (-)
C3H/HeJ MGP_C3HHeJ_G0031146
protein coding gene Chr6:141820874-141822330 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031886
protein coding gene Chr6:147152906-147154361 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0029015
protein coding gene Chr6:136613745-136615203 (-)
CAST/EiJ MGP_CASTEiJ_G0030514
protein coding gene Chr6:141328330-141329785 (-)
CBA/J MGP_CBAJ_G0031106
protein coding gene Chr6:152787926-152789382 (-)
DBA/2J MGP_DBA2J_G0031263
protein coding gene Chr6:136479646-136481102 (-)
FVB/NJ MGP_FVBNJ_G0031214
protein coding gene Chr6:135315891-135317346 (-)
LP/J MGP_LPJ_G0031347
protein coding gene Chr6:143390949-143392404 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031254
protein coding gene Chr6:156575610-156577066 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031918
protein coding gene Chr6:141535824-141537279 (-)
PWK/PhJ MGP_PWKPhJ_G0030241
protein coding gene Chr6:134949607-134951064 (-)
SPRET/EiJ MGP_SPRETEiJ_G0030065
protein coding gene Chr6:139792981-139794438 (-)
WSB/EiJ MGP_WSBEiJ_G0030607
protein coding gene Chr6:142191619-142193074 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 50540 NCBI Gene Model | MGI Sequence Detail 1356 C57BL/6J ±  kb
transcript NM_015777 RefSeq | MGI Sequence Detail 1356 Not Specified  
polypeptide Q9QZ29 UniProt | EBI | MGI Sequence Detail 343 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 23
    Developmental Gene Expression 2
    Gene Ontology 4
  • Earliest
    J:57570 Maeda K, et al., A new member of the alpha4-related molecule (alpha4-b) that binds to the protein phosphatase 2A is expressed selectively in the brain and testis. Eur J Biochem. 1999 Sep;264(3):702-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
06/18/2019
MGI 6.14
The Jackson Laboratory