Adat1
Gene Detail

Symbol Name ID

Adat1 adenosine deaminase, tRNA-specific 1 MGI:1353631

Synonyms

mADAT1

Feature Type

protein coding gene

Genetic Map

Chromosome 8

58.23 cM, cytoband D3
Detailed Genetic Map ± 1 cM


Mapping data(3)

Sequence Map

Chr8:111966908-111992302 bp, - strand From VEGA annotation of GRCm38   25395 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:8096  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Adat1

Human homologs

Human Homolog		ADAT1, adenosine deaminase, tRNA-specific 1
NCBI Gene ID		23536
neXtProt AC		NX_Q9BUB4
Human Synonyms		HADAT1
Human Chr (Location)		16q23.1; chr16:75632247-75657221 (-)  GRCh37.p10

Alleles and phenotypes

All alleles(16) : Targeted(2) Gene trapped(14)

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	metabolic process, RNA processing, ...
Component	cellular_component
Function	adenosine deaminase activity, hydrolase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (1 records)
Data Summary: Results (93)    Tissues (93)    Images (17)
Theiler Stages: 22

Assay Type	Results
RNA in situ	93

cDNA source data(24)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(26) cDNA(25) Primer pair(1)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000029927 (Evidence)
Ensembl Gene Model	ENSMUSG00000031949 (Evidence)
Entrez Gene	30947 (Evidence)
UniGene	282162
DFCI	TC1585760, TC1594238, TC1602992, TC1666837
DoTS	DT.101365157, DT.87036074, DT.94180296
NIA Mouse Gene Index	U030274
EC	3.5.4.34
Consensus CDS Project	CCDS22684.1
International Mouse Knockout Project Status	Adat1

Sequences

Length	Strain/Species
genomic	OTTMUSG00000029927	VEGA Gene Model | MGI Sequence Detail	25395	C57BL/6J
transcript	OTTMUST00000074252	VEGA | MGI Sequence Detail	3159	Not Applicable
polypeptide	OTTMUSP00000038571	VEGA | MGI Sequence Detail	499	Not Applicable

All sequences(35) RefSeq(2) UniProt(2)

Polymorphisms

SNPs(156 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002466	Adenosine deaminase/editase
Protein Ontology	PR:000003748	tRNA-specific adenosine deaminase 1

References

(Earliest) J:60373 Maas S, et al., Sequence, genomic organization and functional expression of the murine tRNA-specific adenosine deaminase ADAT1. Gene. 2000 Feb 8;243(1-2):59-66
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(31)