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Rpl7a Gene Detail
Summary
  • Symbol
    Rpl7a
  • Name
    ribosomal protein L7A
  • Synonyms
    Surf-3, surfeit 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1353472
    NCBI Gene: 27176
  • Gene Overview
    MyGene.info: RPL7A
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:26910764-26913318 bp, + strand
  • From Ensembl annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 2, 19.10 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    24 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1353472
protein coding gene Chr2:26910725-26913318 (.)
129S1/SvImJ MGP_129S1SvImJ_G0025499
protein coding gene Chr2:24882407-24884961 (+)
A/J MGP_AJ_G0025476
protein coding gene Chr2:23938296-23940850 (+)
AKR/J MGP_AKRJ_G0025446
protein coding gene Chr2:24717439-24721400 (+)
BALB/cJ MGP_BALBcJ_G0025472
protein coding gene Chr2:24054396-24058941 (+)
C3H/HeJ MGP_C3HHeJ_G0025233
protein coding gene Chr2:24656682-24660165 (+)
C57BL/6NJ MGP_C57BL6NJ_G0025916
protein coding gene Chr2:25715584-25727008 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023327
protein coding gene Chr2:22777215-22779737 (+)
CAST/EiJ MGP_CASTEiJ_G0024696
protein coding gene Chr2:24534683-24537261 (+)
CBA/J MGP_CBAJ_G0025211
protein coding gene Chr2:26611143-26618678 (+)
DBA/2J MGP_DBA2J_G0025344
protein coding gene Chr2:23752290-23757357 (+)
FVB/NJ MGP_FVBNJ_G0025306
protein coding gene Chr2:23510015-23512569 (+)
LP/J MGP_LPJ_G0025430
protein coding gene Chr2:24826566-24830606 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025337
protein coding gene Chr2:26675118-26677672 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0025975
protein coding gene Chr2:24660208-24662762 (+)
PWK/PhJ MGP_PWKPhJ_G0024444
protein coding gene Chr2:23547875-23551429 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024244
protein coding gene Chr2:24812602-24815154 (+)
WSB/EiJ MGP_WSBEiJ_G0024765
protein coding gene Chr2:24777583-24780487 (+)



Homology
more
  • Human Ortholog
    RPL7A, ribosomal protein L7a
  • Vertebrate Orthologs
    9
  • Human Ortholog
    RPL7A, ribosomal protein L7a
    Orthology source: HomoloGene, HGNC
  • Synonyms
    L7A, SURF3, TRUP
  • Links
    NCBI Gene ID: 6130
    neXtProt AC: NX_P62424
    UniProt: P62424

  • Chr Location
    9q34.2; chr9:133348214-133351425 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000062647 Ensembl Gene Model | MGI Sequence Detail 2555 C57BL/6J ±  kb
transcript ENSMUST00000102898 Ensembl | MGI Sequence Detail 914 Not Applicable  
polypeptide ENSMUSP00000099962 Ensembl | MGI Sequence Detail 266 Not Applicable  
For the selected sequence
Protein
Information
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  • UniProt
    5 Sequences
  • InterPro Domains
    IPR029064 50S ribosomal protein L30e-like
    IPR004037 Ribosomal protein L7Ae conserved site
    IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45
    IPR018492 Ribosomal protein L7Ae/L8/Nhp2 family
    IPR001921 Ribosomal protein L7A/L8
    IPR038524 Ribosomal protein L7A/L8 superfamily
Molecular
Reagents
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  • All nucleic 30
    Genomic 3
    cDNA 26
    Primer pair 1

    Microarray probesets 14
References
more
  • Summaries
    All 42
    Developmental Gene Expression 4
    Gene Ontology 9
    Phenotypes 4
  • Earliest
    J:29566 Williams TJ, et al., The MES-1 murine enhancer element is closely associated with the heterogeneous 5' ends of two divergent transcription units. Mol Cell Biol. 1986 Dec;6(12):4558-69
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory