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Cabp2
Gene Detail
Symbol

Name
ID
Cabp2
calcium binding protein 2
MGI:1352749
Feature Type
protein coding gene
Genetic Map
Chromosome 19
3.79 cM, cytoband A
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr19:4081578-4087340 bp, + strand
From VEGA annotation of GRCm38

  5763 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8487  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: Cabp2

Human
homologs
Human Homolog CABP2, calcium binding protein 2
NCBI Gene ID 51475
neXtProt AC  NX_Q9NPB3
Human Synonyms  DFNB93
Human Chr (Location)  11q13.1; chr11:67518947-67523614 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human CABP2
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Cabp2 interacts with 23 markers (Mir7-1, Mir100, Mir128-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Component cytoplasm, Golgi apparatus, ...
Function calcium ion binding, metal ion binding
External Resources: FuncBase
Expression
cDNA source data(4)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(4) cDNA(4)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000034965 (Evidence)
Ensembl Gene ModelENSMUSG00000024857 (Evidence)
Entrez Gene29866 (Evidence)
UniGene46268
DFCITC1585538
DoTSDT.50315617, DT.91337326, DT.91337327
NIA Mouse Gene IndexU038757
Consensus CDS ProjectCCDS29413.2, CCDS50348.1, CCDS50349.1
International Mouse Knockout Project StatusCabp2
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000034965 VEGA Gene Model | MGI Sequence Detail 5763 C57BL/6J ±  kb
transcript OTTMUST00000088903 VEGA | MGI Sequence Detail 911 Not Applicable 
polypeptide OTTMUSP00000048519 VEGA | MGI Sequence Detail 221 Not Applicable 

For the selected sequences
All sequences(76) RefSeq(38) UniProt(5)
Polymorphisms
SNPs within 2kb(39 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR015754 Calcium binding protein
InterPro IPR018247 EF-Hand 1, calcium-binding site
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand-like domain
Protein Ontology PR:000004934 calcium-binding protein 2
References
(Earliest) J:59389 Haeseleer F, et al., Five members of a novel Ca(2+)-binding protein (CABP) subfamily with similarity to calmodulin. J Biol Chem. 2000 Jan 14;275(2):1247-60
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory