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Dpf1 Gene Detail
Summary
  • Symbol
    Dpf1
  • Name
    D4, zinc and double PHD fingers family 1
  • Synonyms
    Neud4, neuro-d4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1352748
    NCBI Gene: 29861
Location & Maps
more
  • Sequence Map
    Chr7:29303951-29318243 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      14293 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 16.94 cM, cytoband A3
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    DPF1, double PHD fingers 1
  • Vertebrate Orthologs
    8
  • Human Ortholog
    DPF1, double PHD fingers 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BAF45b, NEUD4, neuro-d4
  • Links
    NCBI Gene ID: 8193
    neXtProt AC: NX_Q92782

  • Chr Location
    19q13.2; chr19:38211006-38229714 (-)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    9
  • Gene trapped
    7
  • Targeted
    2
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    291
  • Tissues
    186
  • cDNA Data
    9
  • Literature Summary
    9
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000025006 VEGA Gene Model | MGI Sequence Detail 14293 C57BL/6J ±  kb
transcript OTTMUST00000061548 VEGA | MGI Sequence Detail 2040 Not Applicable  
polypeptide OTTMUSP00000030204 VEGA | MGI Sequence Detail 398 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    38 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 9
    Primer pair 1

    Microarray probesets 4
References
more
  • Summaries
    All 35
    Developmental Gene Expression 9
    Gene Ontology 5
    Phenotypes 5
  • Earliest
    J:59255 Mertsalov IB, et al., Structure and expression of two members of the d4 gene family in mouse. Mamm Genome. 2000 Jan;11(1):72-4
  • Latest
    J:199644 Staahl BT, et al., Kinetic analysis of npBAF to nBAF switching reveals exchange of SS18 with CREST and integration with neural developmental pathways. J Neurosci. 2013 Jun 19;33(25):10348-61
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/20/2016
MGI 6.05 		The Jackson Laboratory