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Tnfrsf19
Gene Detail
Symbol

Name
ID
Tnfrsf19
tumor necrosis factor receptor superfamily, member 19
MGI:1352474
Synonyms
TAJ, TAJ-ALPHA, TRADE, Troy
Feature Type
protein coding gene
Genetic Map
Chromosome 14
32.06 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr14:60963834-61046855 bp, - strand
From NCBI annotation of GRCm38

  83022 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8481  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TNFRSF19
Gene Tree: Tnfrsf19

Human
homologs
TNFRSF19, tumor necrosis factor receptor superfamily, member 19
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 55504
neXtProt AC: NX_Q9NS68

Human Synonyms: TAJ, TAJ-alpha, TRADE, TROY

Human Chr (Location): 13q12.11-q12.3; chr13:23570370-23676105 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(22) : Gene trapped(19) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mutant mice exhibit no obvious physical abnormalities or alterations in behavior, locomotion, or fecundity, however neurons are more resistant to the suppressive action of myelin inhibitors.
 
Interactions
Tnfrsf19 interacts with 334 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (23 records)
Data Summary: Results (261)    Tissues (114)    Images (62)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 2
RNA in situ 234
Northern blot 20
RT-PCR 5
cDNA source data(19)
Other mouse links: Allen Institute   GENSAT   GEO   Expression Atlas
Other vertebrate links: GEISHA TNFRSF19 ; Xenbase tnfrsf19 ; ZFIN tnfrsf19    NEW 
Molecular
reagents
All nucleic(23) cDNA(19) Primer pair(2) Other(2)
Microarray probesets(6)
Other database
links
Ensembl Gene Model ENSMUSG00000060548 (Evidence)
Entrez Gene 29820 (Evidence)
DFCI TC1590727, TC1577033, TC1595347, TC1635703, TC1625988, TC1610706
DoTS DT.101255444, DT.99845113, DT.101391929, DT.101391930, DT.91439724, DT.91375143, DT.101391932, DT.525917
NIA Mouse Gene Index U035646
Consensus CDS Project CCDS36941.1
International Mouse Phenotyping Consortium Status Tnfrsf19
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 29820 NCBI Gene Model | MGI Sequence Detail 83022 C57BL/6J ±  kb
transcript NM_013869 RefSeq | MGI Sequence Detail 4639 C57BL/6 
polypeptide Q9JLL3 UniProt | EBI | MGI Sequence Detail 416 Not Applicable 

For the selected sequences
All sequences(67) RefSeq(4) UniProt(3)
Polymorphisms
RFLP(1) : SNPs within 2kb(521 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001368 TNFR/NGFR cysteine-rich region
InterPro IPR022342 Tumour necrosis factor receptor 19
Protein Ontology PR:000016483 tumor necrosis factor receptor superfamily member 19
Graphical View of Protein Domain Structure
References
(Earliest) J:58926 Hu S, et al., Characterization of TNFRSF19, a novel member of the tumor necrosis factor receptor superfamily. Genomics. 1999 Nov 15;62(1):103-7
(Latest) J:219786 Naillat F, et al., Identification of the genes regulated by Wnt-4, a critical signal for commitment of the ovary. Exp Cell Res. 2015 Mar 15;332(2):163-78
All references(57)
Other
accession IDs
MGI:1890132, MGI:2145715, MGI:2145803

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/28/2015
MGI 5.22
The Jackson Laboratory