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Tnfrsf19
Gene Detail
 Symbol
Name
ID
Tnfrsf19
tumor necrosis factor receptor superfamily, member 19
MGI:1352474
Synonyms TAJ, TAJ-ALPHA, TRADE, Troy
Feature Type protein coding gene
Genetic Map
Chromosome 14
32.06 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr14:60963834-61046855 bp, - strand
From NCBI annotation of GRCm38

  83022 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:8481  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Tnfrsf19

Human
homologs
Human Homolog TNFRSF19, tumor necrosis factor receptor superfamily, member 19
NCBI Gene ID 55504
neXtProt AC  NX_Q9NS68
Human Synonyms  TAJ, TAJ-alpha, TRADE, TROY
Human Chr (Location)  13q12.11-q12.3; chr13:23570370-23676105 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(21) : Gene trapped(19) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
 
Homozygous mutant mice exhibit no obvious physical abnormalities or alterations in behavior, locomotion, or fecundity, however neurons are more resistant to the suppressive action of myelin inhibitors.
 
Interactions
Tnfrsf19 interacts with 335 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process hair follicle development, positive regulation of I-kappaB kinase/NF-kappaB signaling
Component extracellular region, integral component of membrane, ...
External Resources: FuncBase
Expression
Literature Summary: (21 records)
Data Summary: Results (261)    Tissues (114)    Images (62)
Theiler Stages: 10, 14, 15, 16, 17, 18, 19, 20, 21, 22, 23, 24, 25, 26, 27, 28
Assay TypeResults
Immunohistochemistry 2
RNA in situ 234
Northern blot 20
RT-PCR 5
cDNA source data(19)
External Resources: Allen Institute   GENSAT   GEO   Expression Atlas
Molecular
reagents
All nucleic(23) cDNA(19) Primer pair(2) Other(2)
Microarray probesets(6)
Other database
links
Ensembl Gene ModelENSMUSG00000060548 (Evidence)
Entrez Gene29820 (Evidence)
DFCITC1577033, TC1590727, TC1595347, TC1610706, TC1625988, TC1635703
DoTSDT.101255444, DT.101391929, DT.101391930, DT.101391932, DT.525917, DT.91375143, DT.91439724, DT.99845113
NIA Mouse Gene IndexU035646
Consensus CDS ProjectCCDS36941.1
International Mouse Knockout Project StatusTnfrsf19
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 29820 NCBI Gene Model | MGI Sequence Detail 83022 C57BL/6J ±  kb
transcript NM_013869 RefSeq | MGI Sequence Detail 4639 C57BL/6 
polypeptide Q9JLL3 UniProt | EBI | MGI Sequence Detail 416 Not Applicable 

For the selected sequences
All sequences(67) RefSeq(4) UniProt(3)
Polymorphisms RFLP(1) : SNPs within 2kb(521 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR001368 TNFR/NGFR cysteine-rich region
InterPro IPR022342 Tumour necrosis factor receptor 19
Protein Ontology PR:000016483 tumor necrosis factor receptor superfamily member 19
Graphical View of Protein Domain Structure
References (Earliest) J:58926 Hu S, et al., Characterization of TNFRSF19, a novel member of the tumor necrosis factor receptor superfamily. Genomics. 1999 Nov 15;62(1):103-7
(Latest) J:203028 Hasenpusch-Theil K, et al., Transcriptional analysis of Gli3 mutants identifies Wnt target genes in the developing hippocampus. Cereb Cortex. 2012 Dec;22(12):2878-93
All references(55)
Other
accession IDs
MGI:1890132, MGI:2145715, MGI:2145803

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory