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Slco1a6 Gene Detail
Summary
  • Symbol
    Slco1a6
  • Name
    solute carrier organic anion transporter family, member 1a6
  • Synonyms
    4930422F19Rik, Oatp-5, organic anion-transporting polypeptide, Slc21a13
  • Feature Type
    protein coding gene
  • IDs
    MGI:1351906
    NCBI Gene: 28254
  • Alliance
    genome feature page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:142031487-142131903 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 73.42 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    2379 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1351906
 protein coding gene Chr6:142031487-142154247 (-)
129S1/SvImJ ENSMUSG00200032758
 protein coding gene Chr6:139571423-139694564 (-)
A/J ENSMUSG00195008185
 protein coding gene Chr6:138477671-138600874 (-)
AKR/J ENSMUSG00220029448
 protein coding gene Chr6:136704625-136827809 (-)
BALB/cJ ENSMUSG00180015696
 protein coding gene Chr6:138605310-138728456 (-)
C3H/HeJ ENSMUSG00175029907
 protein coding gene Chr6:138504646-138627811 (-)
C57BL/6NJ ENSMUSG00215023764
 protein coding gene Chr6:138675778-138798966 (-)
CAROLI/EiJ no annotation
CAST/EiJ ENSTCUG00005033913
 protein coding gene Chr6:139360600-139471058 (-)
CBA/J ENSMUSG00210004303
 protein coding gene Chr6:138567399-138690491 (-)
DBA/2J ENSMUSG00185020620
 protein coding gene Chr6:139217836-139340995 (-)
FVB/NJ ENSMUSG00205018688
 protein coding gene Chr6:137607948-137720126 (-)
JF1/MsJ ENSUMUG00000008061
 protein coding gene Chr6:137874578-137997721 (-)
LP/J ENSMUSG00230008063
 protein coding gene Chr6:140366114-140478405 (-)
NOD/ShiLtJ ENSMUSG00190005839
 protein coding gene Chr6:139057088-139169237 (-)
NZO/HlLtJ ENSMUSG00225013576
 protein coding gene Chr6:143207940-143331092 (-)
PWK/PhJ ENSLUMG00010034255
 protein coding gene Chr6:136958132-137073972 (-)
SPRET/EiJ ENSMSPG00010029717
 protein coding gene Chr6:140875807-140984142 (-)
WSB/EiJ ENSIUOG00005021708
 protein coding gene Chr6:139299877-139411894 (-)



Homology
more
  • Human Ortholog
    SLCO1A2, solute carrier organic anion transporter family member 1A2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SLCO1A2, solute carrier organic anion transporter family member 1A2
  • Synonyms
    OATP, OATP1A2, OATP-A, SLC21A3
  • Links
    NCBI Gene ID: 6579
    UniProt: P46721

  • Chr Location
    12p12.1; chr12:21264600-21419676 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    17 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    671
  • Tissues
    46
  • cDNA Data
    33
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 28254 NCBI Gene Model | MGI Sequence Detail 100417 C57BL/6J ±  kb
transcript NM_023718 RefSeq | MGI Sequence Detail 2804 C57BL/6  
polypeptide Q99J94 UniProt | EBI | MGI Sequence Detail 670 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 33
    cDNA 33

    Microarray probesets 3
Other
Accession IDs
less
MGI:1921023, MGI:2141471
References
more
  • Summaries
    All 49
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 17
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:390393 Richter FC, et al., Crosstalk between CD8+ T cells and systemic bile acid metabolism shapes antiviral immunity and immunopathology. JCI Insight. 2026 Jun 22;11(12)
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/08/2026
MGI 6.24 		The Jackson Laboratory