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Slco2b1
Gene Detail
Symbol

Name
ID
Slco2b1
solute carrier organic anion transporter family, member 2b1
MGI:1351872
Synonyms
OATP-B, Slc21a9
Feature Type
protein coding gene
Genetic Map
Chromosome 7
54.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:99657804-99711340 bp, - strand
From VEGA annotation of GRCm38

  53537 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:21419  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: SLCO2B1
Gene Tree: Slco2b1

Human
homologs
SLCO2B1, solute carrier organic anion transporter family, member 2B1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 11309
neXtProt AC: NX_O94956

Human Synonyms: OATP2B1, OATPB, OATP-B, SLC21A9

Human Chr (Location): 11q13; chr11:75150987-75206400 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Slco2b1 interacts with 318 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (3)    Tissues (3)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 3
cDNA source data(12)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase slco2b1    NEW 
Molecular
reagents
All nucleic(13) cDNA(12) Primer pair(1)
Microarray probesets(6)
Other database
links
VEGA Gene Model OTTMUSG00000024669 (Evidence)
Ensembl Gene Model ENSMUSG00000030737 (Evidence)
Entrez Gene 101488 (Evidence)
DFCI TC1580096, TC1626509, TC1658072, TC1660525, TC1696067
DoTS DT.40174977, DT.94129804, DT.94178445, DT.94178446, DT.94259216, DT.94259220, DT.97365885, DT.99853106
NIA Mouse Gene Index U008441, U028895
Consensus CDS Project CCDS21485.1, CCDS57567.1
International Mouse Phenotyping Consortium Status Slco2b1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024669 VEGA Gene Model | MGI Sequence Detail 53537 C57BL/6J ±  kb
transcript OTTMUST00000060676 VEGA | MGI Sequence Detail 4369 Not Applicable 
polypeptide OTTMUSP00000029622 VEGA | MGI Sequence Detail 693 Not Applicable 

For the selected sequences
All sequences(89) RefSeq(16) UniProt(11)
Polymorphisms
SNPs within 2kb(726 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002350 Kazal domain
InterPro IPR020846 Major facilitator superfamily domain
InterPro IPR004156 Organic anion transporter polypeptide OATP
Protein Ontology PR:000015227 solute carrier organic anion transporter family member 2B1
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(32)
Other
accession IDs
MGI:2141865, MGI:2142064

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/25/2015
MGI 6.0
The Jackson Laboratory