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Slco2b1
Gene Detail
Symbol

Name
ID
Slco2b1
solute carrier organic anion transporter family, member 2b1
MGI:1351872
Synonyms
OATP-B, Slc21a9
Feature Type
protein coding gene
Genetic Map
Chromosome 7
54.11 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:99657804-99711340 bp, - strand
From VEGA annotation of GRCm38

  53537 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:21419  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Slco2b1

Human
homologs
Human Homolog SLCO2B1, solute carrier organic anion transporter family, member 2B1
NCBI Gene ID 11309
neXtProt AC  NX_O94956
Human Synonyms  OATP2B1, OATPB, OATP-B, SLC21A9
Human Chr (Location)  11q13; chr11:75150987-75214669 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(1) : Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slco2b1 interacts with 319 markers (Mir1a-1, Mir1a-2, Mir7-1, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (1 records)
Data Summary: Results (3)    Tissues (3)    Images (1)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 3
cDNA source data(12)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(13) cDNA(12) Primer pair(1)
Microarray probesets(6)
Other database
links
VEGA Gene ModelOTTMUSG00000024669 (Evidence)
Ensembl Gene ModelENSMUSG00000030737 (Evidence)
Entrez Gene101488 (Evidence)
DFCITC1580096, TC1626509, TC1658072, TC1660525, TC1696067
DoTSDT.40174977, DT.94129804, DT.94178445, DT.94178446, DT.94259216, DT.94259220, DT.97365885, DT.99853106
NIA Mouse Gene IndexU008441, U028895
Consensus CDS ProjectCCDS21485.1, CCDS57567.1
International Mouse Knockout Project StatusSlco2b1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024669 VEGA Gene Model | MGI Sequence Detail 53537 C57BL/6J ±  kb
transcript OTTMUST00000060676 VEGA | MGI Sequence Detail 4369 Not Applicable 
polypeptide OTTMUSP00000029622 VEGA | MGI Sequence Detail 693 Not Applicable 

For the selected sequences
All sequences(79) RefSeq(6) UniProt(11)
Polymorphisms
SNPs within 2kb(726 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002350 Kazal domain
InterPro IPR016196 Major facilitator superfamily domain, general substrate transporter
InterPro IPR004156 Organic anion transporter polypeptide OATP
Protein Ontology PR:000015227 solute carrier organic anion transporter family member 2B1
References
(Earliest) J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(34)
Other
accession IDs
MGI:2141865, MGI:2142064

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory