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Slco3a1
Gene Detail
Symbol

Name
ID
Slco3a1
solute carrier organic anion transporter family, member 3a1
MGI:1351867
Synonyms
5830414C08Rik, Anr1, MJAM, OATP-D, Slc21a11
Feature Type
protein coding gene
Genetic Map
Chromosome 7
42.95 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:74275419-74554780 bp, - strand
From VEGA annotation of GRCm38

  279362 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40862  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Gene Tree: Slco3a1

Human
homologs
Human Homolog SLCO3A1, solute carrier organic anion transporter family, member 3A1
NCBI Gene ID 28232
neXtProt AC  NX_Q9UIG8
Human Synonyms  OATP3A1, OATPD, OATP-D, SLC21A11
Human Chr (Location)  15q26; chr15:91853708-92172435 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Slco3a1 interacts with 332 markers (Mir1b, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (25)    Tissues (11)    Images (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 25
cDNA source data(13)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(14) cDNA(13) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000024304 (Evidence)
Ensembl Gene ModelENSMUSG00000025790 (Evidence)
Entrez Gene108116 (Evidence)
DFCITC1578949, TC1619327, TC1641669, TC1671671
NIA Mouse Gene IndexU043854
Consensus CDS ProjectCCDS21366.1, CCDS21367.1
International Mouse Knockout Project StatusSlco3a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024304 VEGA Gene Model | MGI Sequence Detail 279362 C57BL/6J ±  kb
transcript OTTMUST00000059524 VEGA | MGI Sequence Detail 4589 Not Applicable 
polypeptide OTTMUSP00000028955 VEGA | MGI Sequence Detail 710 Not Applicable 

For the selected sequences
All sequences(60) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(3153 from dbSNP Build 137)    SNPs within 2kb including multiple locations(3157)
Protein-related
information
ResourceIDDescription
InterPro IPR002350 Kazal domain
InterPro IPR020846 Major facilitator superfamily domain
InterPro IPR016196 Major facilitator superfamily domain, general substrate transporter
InterPro IPR004156 Organic anion transporter polypeptide OATP
Protein Ontology PR:000015228 solute carrier organic anion transporter family member 3A1
References
(Earliest) J:45837 Melia MJ, et al., Identification of androgen-regulated genes in mouse kidney by representational difference analysis and random arbitrarily primed polymerase chain reaction. Endocrinology. 1998 Feb;139(2):688-95
(Latest) J:201184 Ferrara AM, et al., Changes in thyroid status during perinatal development of MCT8-deficient male mice. Endocrinology. 2013 Jul;154(7):2533-41
All references(38)
Other
accession IDs
MGI:1328325, MGI:1926070, MGI:2142386

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory