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Slco3a1
Gene Detail
Symbol

Name
ID
Slco3a1
solute carrier organic anion transporter family, member 3a1
MGI:1351867
Synonyms
5830414C08Rik, Anr1, MJAM, OATP-D, Slc21a11
Feature Type
protein coding gene
Genetic Map
Chromosome 7
42.95 cM, cytoband D1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:74275419-74554780 bp, - strand
From VEGA annotation of GRCm38

  279362 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:40862  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

HCOP human homology predictions: SLCO3A1
Gene Tree: Slco3a1

Human
homologs
SLCO3A1, solute carrier organic anion transporter family, member 3A1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 28232
neXtProt AC: NX_Q9UIG8

Human Synonyms: OATP3A1, OATPD, OATP-D, SLC21A11

Human Chr (Location): 15q26; chr15:91853708-92172435 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Targeted(5)
Incidental mutations (data from Mutagenetix , APF , CvDC )
Interactions
Slco3a1 interacts with 332 markers (Mir1b, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (3 records)
Data Summary: Results (25)    Tissues (11)    Images (11)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 25
cDNA source data(86)
Other mouse links: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(87) cDNA(86) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000024304 (Evidence)
Ensembl Gene Model ENSMUSG00000025790 (Evidence)
Entrez Gene 108116 (Evidence)
UniGene 425467
DFCI TC1578949, TC1619327, TC1641669, TC1671671
DoTS DT.101223789, DT.101268241, DT.531004, DT.87072394
NIA Mouse Gene Index U043854
Consensus CDS Project CCDS21366.1, CCDS21367.1
International Mouse Phenotyping Consortium Status Slco3a1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000024304 VEGA Gene Model | MGI Sequence Detail 279362 C57BL/6J ±  kb
transcript OTTMUST00000059524 VEGA | MGI Sequence Detail 4589 Not Applicable 
polypeptide OTTMUSP00000028955 VEGA | MGI Sequence Detail 710 Not Applicable 

For the selected sequences
All sequences(65) RefSeq(4) UniProt(5)
Polymorphisms
SNPs within 2kb(3153 from dbSNP Build 137)    SNPs within 2kb including multiple locations(3157)
Protein-related
information
ResourceIDDescription
InterPro IPR002350 Kazal domain
InterPro IPR020846 Major facilitator superfamily domain
InterPro IPR004156 Organic anion transporter polypeptide OATP
Protein Ontology PR:000015228 solute carrier organic anion transporter family member 3A1
References
(Earliest) J:45837 Melia MJ, et al., Identification of androgen-regulated genes in mouse kidney by representational difference analysis and random arbitrarily primed polymerase chain reaction. Endocrinology. 1998 Feb;139(2):688-95
(Latest) J:201184 Ferrara AM, et al., Changes in thyroid status during perinatal development of MCT8-deficient male mice. Endocrinology. 2013 Jul;154(7):2533-41
All references(38)
Other
accession IDs
MGI:1328325, MGI:1926070, MGI:2142386

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
08/18/2015
MGI 6.0
The Jackson Laboratory