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D10Jhu81e Gene Detail
Summary
  • Symbol
    D10Jhu81e
  • Name
    DNA segment, Chr 10, Johns Hopkins University 81 expressed
  • Feature Type
    protein coding gene
  • IDs
    MGI:1351861
    NCBI Gene: 28295
  • Gene Overview
    MyGene.info: GATD3A
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr10:78162067-78169768 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 10, 39.72 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    16 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1351861
protein coding gene Chr10:78162066-78169782 (-)
129S1/SvImJ MGP_129S1SvImJ_G0017417
protein coding gene Chr10:78596980-78604679 (-)
A/J MGP_AJ_G0017395
protein coding gene Chr10:75861817-75869516 (-)
AKR/J MGP_AKRJ_G0017358
protein coding gene Chr10:77896231-77903932 (-)
BALB/cJ MGP_BALBcJ_G0017357
protein coding gene Chr10:76030129-76037830 (-)
C3H/HeJ MGP_C3HHeJ_G0017180
protein coding gene Chr10:78001034-78008735 (-)
C57BL/6NJ MGP_C57BL6NJ_G0017813
protein coding gene Chr10:81376000-81383701 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0015504
protein coding gene Chr10:72199239-72205902 (-)
CAST/EiJ MGP_CASTEiJ_G0016750
protein coding gene Chr10:78305138-78312811 (-)
CBA/J MGP_CBAJ_G0017152
protein coding gene Chr10:84483357-84491058 (-)
DBA/2J MGP_DBA2J_G0017260
protein coding gene Chr10:75104820-75112521 (-)
FVB/NJ MGP_FVBNJ_G0017252
protein coding gene Chr10:74282062-74289763 (-)
LP/J MGP_LPJ_G0017331
protein coding gene Chr10:79038583-79046284 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0017279
protein coding gene Chr10:86461143-86468844 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0017855
protein coding gene Chr10:77941484-77949185 (-)
PWK/PhJ MGP_PWKPhJ_G0016532
protein coding gene Chr10:74982632-74990475 (-)
SPRET/EiJ MGP_SPRETEiJ_G0016317
protein coding gene Chr10:77157597-77165605 (-)
WSB/EiJ MGP_WSBEiJ_G0016810
protein coding gene Chr10:77926639-77934423 (-)



Homology
more
  • Human Ortholog
    GATD3A, glutamine amidotransferase like class 1 domain containing 3A
  • Vertebrate Orthologs
    11
  • Human Ortholog
    GATD3A, glutamine amidotransferase like class 1 domain containing 3A
    Orthology source: HomoloGene, HGNC
  • Synonyms
    C21orf33, ES1, GATD3, GT335, HES1, KNPH, KNPI
  • Links
    NCBI Gene ID: 8209
    neXtProt AC: NX_A0A0B4J2D5, NX_P0DPI2
    UniProt: P0DPI2

  • Chr Location
    21q22.3; chr21:44133612-44145723 (+)  GRCh38.p7

  • Human Ortholog
    GATD3B, glutamine amidotransferase like class 1 domain containing 3B
    Orthology source: HomoloGene
  • Synonyms
    KNP-I
  • Links
    NCBI Gene ID: 102724023
    neXtProt AC: NX_A0A0B4J2D5
    UniProt: A0A0B4J2D5

  • Chr Location
    chr21:5097172-5128463 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 28295 NCBI Gene Model | MGI Sequence Detail 7702 C57BL/6J ±  kb
transcript NM_138601 RefSeq | MGI Sequence Detail 1367 C57BL/6  
polypeptide Q9D172 UniProt | EBI | MGI Sequence Detail 266 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 97
    Genomic 8
    cDNA 87
    Primer pair 2

    Microarray probesets 3
References
more
  • Summaries
    All 33
    Developmental Gene Expression 3
    Gene Ontology 4
    Phenotypes 7
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:265628 Gaudet P, et al., Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Brief Bioinform. 2011 Sep;12(5):449-62

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory