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Cstf3 Gene Detail
Summary
  • Symbol
    Cstf3
  • Name
    cleavage stimulation factor, 3' pre-RNA, subunit 3
  • Synonyms
    4732468G05Rik, MGC:6373
  • Feature Type
    protein coding gene
  • IDs
    MGI:1351825
    NCBI Gene: 228410
  • Gene Overview
    MyGene.info: CSTF3
Location & Maps
more
  • Sequence Map
    Chr2:104590523-104665429 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      74907 bp   ±  kb flank

  • Genome Browsers
Homology
more
  • Human Ortholog
    CSTF3, cleavage stimulation factor subunit 3
  • Vertebrate Orthologs
    10
  • Human Ortholog
    CSTF3, cleavage stimulation factor subunit 3
    Orthology source: HGNC, HomoloGene
  • Synonyms
    CSTF-77
  • Links
    NCBI Gene ID: 1479
    neXtProt AC: NX_Q12996

  • Chr Location
    11p13; chr11:33084584-33161491 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 1014
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;1 western clawed frog;1 zebrafish
  • HCOP
    human homology predictions: CSTF3
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    12 phenotype references
  • All Mutations and Alleles
    168
  • Chemically induced (other)
    1
  • Gene trapped
    162
  • Radiation induced
    1
  • Targeted
    4
  • Genomic Mutations
    2 involving Cstf3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014953 VEGA Gene Model | MGI Sequence Detail 74907 C57BL/6J ±  kb
transcript OTTMUST00000035498 VEGA | MGI Sequence Detail 2817 Not Applicable  
polypeptide OTTMUSP00000015891 VEGA | MGI Sequence Detail 717 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    432 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 11
    cDNA 11

    Microarray probesets 5
Other
Accession IDs
less
MGI:2139490, MGI:2444669
References
more
  • Summaries
    All 36
    Developmental Gene Expression 2
    Gene Ontology 4
    Phenotypes 12
  • Earliest
    J:58552 Gawin B, et al., A 7.5 Mb sequence-ready PAC contig and gene expression map of human chromosome 11p13-p14.1. Genome Res. 1999 Nov;9(11):1074-86
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
05/17/2016
MGI 6.03
The Jackson Laboratory