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Gyg
Gene Detail
 Symbol
Name
ID
Gyg
glycogenin
MGI:1351614
Feature Type protein coding gene
Genetic Map
Chromosome 3
6.19 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr3:20122084-20155317 bp, - strand
From VEGA annotation of GRCm38

  33234 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31219  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 2 zebrafish

Protein SuperFamily: glycogenin (glycosyl transferase)
Gene Tree: Gyg

Human
homologs
Human Homolog GYG1, glycogenin 1
NCBI Gene ID 2992
neXtProt AC  NX_P46976
Human Synonyms  GSD15, GYG
Human Chr (Location)  3q24-q25.1; chr3:148991408-149027669 (+)  GRCh38
Disease Associations  (1) Diseases Associated with Human GYG1
Mutations,
alleles, and
phenotypes
All mutations/alleles(4) : Gene trapped(1) Targeted(3)
Incidental mutations (data from APF )
Interactions
Gyg interacts with 118 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (9 annotations)
Process glycogen biosynthetic process
Component extracellular vesicular exosome, membrane
Function glucose binding, glycogenin glucosyltransferase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (142)    Tissues (98)    Images (27)
Theiler Stages: 22, 23
Assay TypeResults
RNA in situ 142
cDNA source data(110)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(110) cDNA(110)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000029310 (Evidence)
Ensembl Gene ModelENSMUSG00000019528 (Evidence)
Entrez Gene27357 (Evidence)
UniGene6375
DFCITC1573012
DoTSDT.496827, DT.94145856, DT.97409169
NIA Mouse Gene IndexU023866
EC2.4.1.186
Consensus CDS ProjectCCDS50873.1
International Mouse Knockout Project StatusGyg
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000029310 VEGA Gene Model | MGI Sequence Detail 33234 C57BL/6J ±  kb
transcript OTTMUST00000072630 VEGA | MGI Sequence Detail 1922 Not Applicable 
polypeptide OTTMUSP00000062792 VEGA | MGI Sequence Detail 377 Not Applicable 

For the selected sequences
All sequences(66) RefSeq(8) UniProt(4)
Polymorphisms SNPs within 2kb(268 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR002495 Glycosyl transferase, family 8
Protein Ontology PR:000008361 glycogenin-1
References (Earliest) J:58254 van Maanen M, et al., Characterization of mouse glycogenin-1 cDNA and promoter region. Biochim Biophys Acta. 1999 Oct 28;1447(2-3):284-90
(Latest) J:205051 Miller JA, et al., Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates. Development. 2013 Nov;140(22):4633-44
All references(38)
Other
accession IDs
MGI:2139868

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory