Gyg
Gene Detail

Symbol Name ID

Gyg glycogenin MGI:1351614

Feature Type

protein coding gene

Genetic Map

Chromosome 3

6.19 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr3:20122084-20155317 bp, - strand From VEGA annotation of GRCm38   33234 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Vertebrate homology

HomoloGene:31219  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 cattle; 1 dog; 1 chicken; 2 zebrafish

Protein SuperFamily: glycogenin (glycosyl transferase)
Gene Tree: Gyg

Human homologs

Human Homolog		GYG1, glycogenin 1
NCBI Gene ID		2992
neXtProt AC		NX_P46976
Human Synonyms		GSD15, GYG
Human Chr (Location)		3q24-q25.1; chr3:148709195-148745456 (+)  GRCh37.p10
Disease Associations		(1) Diseases Associated with Human GYG1

Alleles and phenotypes

All alleles(3) : Targeted(2) Gene trapped(1)

Gene Ontology (GO) classifications

All GO classifications: (8 annotations)

Process	glycogen biosynthetic process, metabolic process
Function	glucose binding, glycogenin glucosyltransferase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (4 records)
Data Summary: Results (142)    Tissues (98)    Images (27)
Theiler Stages: 22, 23

Assay Type	Results
RNA in situ	142

cDNA source data(103)
External Resources: Allen Institute   GEO   ArrayExpress

Molecular reagents

All nucleic(103) cDNA(103)
Microarray probesets(4)

Other database links

VEGA Gene Model	OTTMUSG00000029310 (Evidence)
Ensembl Gene Model	ENSMUSG00000019528 (Evidence)
Entrez Gene	27357 (Evidence)
UniGene	6375
DFCI	TC1573012
DoTS	DT.496827, DT.94145856, DT.97409169
NIA Mouse Gene Index	U023866
EC	2.4.1.186
Consensus CDS Project	CCDS50873.1
International Mouse Knockout Project Status	Gyg

Sequences

Length	Strain/Species
genomic	OTTMUSG00000029310	VEGA Gene Model | MGI Sequence Detail	33234	C57BL/6J
transcript	OTTMUST00000072630	VEGA | MGI Sequence Detail	1922	Not Applicable
polypeptide	OTTMUSP00000062792	VEGA | MGI Sequence Detail	377	Not Applicable

All sequences(58) RefSeq(2) UniProt(4)

Polymorphisms

SNPs(251 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002495	Glycosyl transferase, family 8
Protein Ontology	PR:000008361	glycogenin-1

References

(Earliest) J:58254 van Maanen M, et al., Characterization of mouse glycogenin-1 cDNA and promoter region. Biochim Biophys Acta. 1999 Oct 28;1447(2-3):284-90
(Latest) J:193325 Boj SF, et al., Diabetes risk gene and Wnt effector Tcf7l2/TCF4 controls hepatic response to perinatal and adult metabolic demand. Cell. 2012 Dec 21;151(7):1595-607
All references(34)

Other accession IDs

MGI:2139868