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Nup62
Gene Detail
 Symbol
Name
ID
Nup62
nucleoporin 62
MGI:1351500
Synonyms D7Ertd649e, Nupc1, p62
Feature Type protein coding gene
Genetic Map
Chromosome 7
28.93 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr7:44816088-44830809 bp, + strand
From VEGA annotation of GRCm38

  14722 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:68773  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Nup62

Human
homologs
Human Homolog NUP62, nucleoporin 62kDa
NCBI Gene ID 23636
neXtProt AC  NX_P37198
Human Synonyms  IBSN, p62, SNDI
Human Chr (Location)  19q13.33; chr19:49906825-49929731 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human NUP62
Alleles
and
phenotypes
All alleles(3) : Targeted(2) Transgenic(1)
 
Mice homozygous for a transgenic gene disruption exhibit embryonic lethality at E7.
 
Gene Ontology
(GO)
classifications
All GO classifications: (34 annotations)
Process cell aging, cell death, ...
Component cytoplasm, cytoskeleton, ...
Function protein binding, PTB domain binding, ...
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (3)    Tissues (1)   
Theiler Stages: 15
Assay TypeResults
Western blot 3
cDNA source data(23)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(24) cDNA(23) Primer pair(1)
Microarray probesets(9)
Other database
links
VEGA Gene ModelOTTMUSG00000021116 (Evidence)
Ensembl Gene ModelENSMUSG00000043858 (Evidence)
Entrez Gene18226 (Evidence)
DFCITC1571859, TC1662207, TC1735150, TC1748436
DoTSDT.110992273, DT.110992460, DT.533945, DT.91354306, DT.91411852
NIA Mouse Gene IndexU008053
Consensus CDS ProjectCCDS21216.1
International Mouse Knockout Project StatusNup62
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000021116 VEGA Gene Model | MGI Sequence Detail 14722 C57BL/6J ±  kb
transcript OTTMUST00000049972 VEGA | MGI Sequence Detail 2719 Not Applicable 
polypeptide OTTMUSP00000023256 VEGA | MGI Sequence Detail 526 Not Applicable 

For the selected sequences
All sequences(67) RefSeq(2) UniProt(8)
Polymorphisms SNPs within 2kb(119 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007758 Nucleoporin, NSP1-like, C-terminal
InterPro IPR026010 Nucleoporin NSP1/NUP62
Protein Ontology PR:000011521 nuclear pore glycoprotein p62
References (Earliest) J:11463 Cordes V, et al., Nuclear pore complex glycoprotein p62 of Xenopus laevis and mouse: cDNA cloning and identification of its glycosylated region. Eur J Cell Biol. 1991 Jun;55(1):31-47
(Latest) J:187070 Beaslas O, et al., Silencing of OSBP-related protein 8 (ORP8) modifies the macrophage transcriptome, nucleoporin p62 distribution, and migration capacity. Exp Cell Res. 2012 Sep 10;318(15):1933-45
All references(45)
Other
accession IDs
MGD-MRK-35636, MGI:107175, MGI:1277198, MGI:2141843, MGI:2141941, MGI:2142031, MGI:2142164

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
04/08/2014
MGI 5.17
The Jackson Laboratory