About   Help   FAQ
Golga5
Gene Detail
Symbol

Name
ID
Golga5
golgi autoantigen, golgin subfamily a, 5
MGI:1351475
Synonyms
Ret-II
Feature Type
protein coding gene
Genetic Map
Chromosome 12
51.51 cM, cytoband F1
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr12:102469134-102497902 bp, + strand
From Ensembl annotation of GRCm38

  28769 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:38009  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: GOLGA5
Gene Tree: Golga5

Human
homologs
GOLGA5, golgin A5
Orthology source: HGNC, HomoloGene

IDs:
NCBI Gene ID: 9950
neXtProt AC: NX_Q8TBA6

Human Synonyms: GOLIM5, ret-II, RFG5

Human Chr (Location): 14q32.12; chr14:92794231-92839963 (+)  GRCh38.p2

Disease Associations: (1) Diseases Associated with Human GOLGA5

Mutations,
alleles, and
phenotypes
All mutations/alleles(11) : Gene trapped(8) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Golga5 interacts with 114 markers (Mir15a, Mir15b, Mir16-1, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (23 annotations)
Process Golgi organization, Golgi vesicle transport, ...
Component cis-Golgi network, COPI-coated vesicle membrane, ...
Function protein binding, protein binding, bridging, ...
External Resources: FuncBase
Expression
Literature Summary: (1 records)
cDNA source data(56)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase golga5 ; ZFIN golga5    NEW 
Molecular
reagents
All nucleic(56) cDNA(56)
Microarray probesets(3)
Other database
links
Ensembl Gene Model ENSMUSG00000021192 (Evidence)
Entrez Gene 27277 (Evidence)
UniGene 273370
DFCI TC1579215
DoTS DT.101372287, DT.488940, DT.55217680
NIA Mouse Gene Index U014304
Consensus CDS Project CCDS36526.1
International Mouse Phenotyping Consortium Status Golga5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000021192 Ensembl Gene Model | MGI Sequence Detail 28769 C57BL/6J ±  kb
transcript ENSMUST00000179218 Ensembl | MGI Sequence Detail 2825 Not Applicable 
polypeptide ENSMUSP00000137305 Ensembl | MGI Sequence Detail 729 Not Applicable 

For the selected sequences
All sequences(29) RefSeq(6) UniProt(1)
Polymorphisms
SNPs within 2kb(239 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR019177 Golgin subfamily A member 5
Protein Ontology PR:000008134 golgin subfamily A member 5
References
(Earliest) J:52425 Bascom RA, et al., Identification and characterization of golgin-84, a novel Golgi integral membrane protein a cyto-plasmic coiled-coil domain [published erratum appears in J Biol Chem 1999 Apr 30;274(18):12950]. J Biol Chem. 1999 Jan 29;274(5):2953-62
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
Warranty Disclaimer & Copyright Notice
Send questions and comments to User Support.
last database update
07/21/2015
MGI 5.22
The Jackson Laboratory