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Vmn2r-ps54 Pseudogene Detail
Summary
  • Symbol
    Vmn2r-ps54
  • Name
    vomeronasal 2, receptor, pseudogene 54
  • Synonyms
    1700108E19Rik, 4930562N12Rik, Casr-rs5, Gprc2a-rs5
  • Feature Type
    pseudogene
  • IDs
    MGI:1351350
    NCBI Gene: 75835
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr7:41668014-41727193 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 28.25 cM, cytoband B2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    605 from dbSNP Build 142
  • Strain Annotations
    14
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1351350
pseudogene Chr7:41667979-41727193 (+)
129S1/SvImJ MGP_129S1SvImJ_G0039852
pseudogene Chr7:41450871-41518927 (+)
A/J MGP_AJ_G0039853
pseudogene Chr7:41108463-41109966 (+)
AKR/J MGP_AKRJ_G0039780
pseudogene Chr7:41767769-41831354 (+)
BALB/cJ MGP_BALBcJ_G0039826
pseudogene Chr7:40763429-40822329 (+)
C3H/HeJ MGP_C3HHeJ_G0039479
pseudogene Chr7:42375006-42915962 (+)
C57BL/6NJ MGP_C57BL6NJ_G0040400
pseudogene Chr7:43524415-43597829 (+)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0039449
pseudogene Chr7:44840183-44919901 (+)
DBA/2J MGP_DBA2J_G0039650
pseudogene Chr7:40398629-40466845 (+)
FVB/NJ MGP_FVBNJ_G0039609
pseudogene Chr7:40082503-40162350 (+)
LP/J MGP_LPJ_G0039687
pseudogene Chr7:42503771-42505274 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0039605
pseudogene Chr7:43694994-44323094 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0040497
pseudogene Chr7:41013666-41077423 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0038819
pseudogene Chr7:41462696-41994199 (+)



Homology
less
Gene Ontology
(GO)
Classifications
less
Expression
less
  • cDNA Data
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 75835 NCBI Gene Model | MGI Sequence Detail 59180 C57BL/6J ±  kb
transcript NR_004441 RefSeq | MGI Sequence Detail 2952 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 5
    cDNA 5

    Microarray probesets 3
Other
Accession IDs
less
MGI:1101766, MGI:1921542, MGI:1923085
References
more
  • Summaries
    All 16
  • Earliest
    J:29900 Ho C, et al., A mouse model of human familial hypocalciuric hypercalcemia and neonatal severe hyperparathyroidism [see comments]. Nat Genet. 1995 Dec;11(4):389-94
  • Latest
    J:122919 Yu X, et al., Using an advanced intercross line to identify quantitative trait loci controlling immune response during collagen-induced arthritis. Genes Immun. 2007 Jun;8(4):296-301

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
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Funding Information
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last database update
09/05/2019
MGI 6.14
The Jackson Laboratory