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Rps11
Gene Detail
 Symbol
Name
ID
Rps11
ribosomal protein S11
MGI:1351329
Feature Type protein coding gene
Genetic Map
Chromosome 7
29.14 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr7:45122388-45124389 bp, - strand
From NCBI annotation of GRCm38

  2002 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:88443  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Rps11

Human
homologs
Human Homolog RPS11, ribosomal protein S11
NCBI Gene ID 6205
neXtProt AC  NX_P62280
Human Synonyms  S11
Human Chr (Location)  19q13.3; chr19:49496365-49499712 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(36) : Gene trapped(34) Targeted(2)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Rps11 interacts with 4 markers (Mir302b, Mir302d, Mir375, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process osteoblast differentiation, translation
Component cytosolic small ribosomal subunit, extracellular vesicular exosome, ...
Function poly(A) RNA binding, RNA binding, ...
This is a GO Consortium Reference Genome Project gene.
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (4)    Tissues (4)    Images (1)
Theiler Stages: 22
Assay TypeResults
RNA in situ 4
cDNA source data(5)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(6) Primer pair(1)
Microarray probesets(2)
Other database
links
Ensembl Gene ModelENSMUSG00000003429 (Evidence)
Entrez Gene27207 (Evidence)
DoTSDT.497112
Consensus CDS ProjectCCDS39947.1
International Mouse Knockout Project StatusRps11
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic 27207 NCBI Gene Model | MGI Sequence Detail 2002 C57BL/6J ±  kb
transcript NM_013725 RefSeq | MGI Sequence Detail 602 C57BL/6 
polypeptide P62281 UniProt | EBI | MGI Sequence Detail 158 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(4)
Polymorphisms SNPs within 2kb(87 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR012340 Nucleic acid-binding, OB-fold
InterPro IPR000266 Ribosomal protein S17
InterPro IPR019979 Ribosomal protein S17, conserved site
Protein Ontology PR:000014252 40S ribosomal protein S11
Graphical View of Protein Domain Structure
References (Earliest) J:1572 Varmuza S, et al., Isolation of epiblast-specific cDNA clones by differential hybridization with polymerase chain reaction-amplified probes derived from single embryos. Mol Reprod Dev. 1992 Aug;32(4):339-48
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/16/2014
MGI 5.19
The Jackson Laboratory