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Ncoa4
Gene Detail
 Symbol
Name
ID
Ncoa4
nuclear receptor coactivator 4
MGI:1350932
Synonyms 1110034E15Rik, 4432406M01Rik
Feature Type protein coding gene
Genetic Map
Chromosome 14
19.40 cM, cytoband B
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr14:32159865-32179855 bp, + strand
From VEGA annotation of GRCm38

  19991 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:38052  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 zebrafish

Gene Tree: Ncoa4

Human
homologs
Human Homolog NCOA4, nuclear receptor coactivator 4
NCBI Gene ID 8031
neXtProt AC  NX_Q13772
Human Synonyms  ARA70, ELE1, PTC3, RFG
Human Chr (Location)  10q11.2; chr10:46005088-46030714 (-)  GRCh38
Disease Associations  (1) Diseases Associated with Human NCOA4
Mutations,
alleles, and
phenotypes
All mutations/alleles(80) : Gene trapped(77) Targeted(3)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ncoa4 interacts with 364 markers (Mir1b, Mir10b, Mir17, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (3 annotations)
Process biological_process
Component mitochondrion
Function molecular_function
External Resources: FuncBase
Expression
Literature Summary: (3 records)
Data Summary: Results (34)    Tissues (25)    Images (2)
Theiler Stages: 15, 17, 19, 23
Assay TypeResults
RNA in situ 34
cDNA source data(22)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(23) cDNA(23)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000036491 (Evidence)
Ensembl Gene ModelENSMUSG00000056234 (Evidence)
Entrez Gene27057 (Evidence)
DFCITC1573906, TC1584756, TC1703110
NIA Mouse Gene IndexU014498, U015473
Consensus CDS ProjectCCDS36863.1
International Mouse Knockout Project StatusNcoa4
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036491 VEGA Gene Model | MGI Sequence Detail 19991 C57BL/6J ±  kb
transcript OTTMUST00000093552 VEGA | MGI Sequence Detail 4065 Not Applicable 
polypeptide OTTMUSP00000051929 VEGA | MGI Sequence Detail 625 Not Applicable 

For the selected sequences
All sequences(94) RefSeq(10) UniProt(16)
Polymorphisms SNPs within 2kb(92 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR022174 Nuclear coactivator
Protein Ontology PR:000011043 nuclear receptor coactivator 4
References (Earliest) J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(39)
Other
accession IDs
MGI:1913942, MGI:1915907, MGI:2145605

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/23/2014
MGI 5.19
The Jackson Laboratory