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Fkbp9
Gene Detail
Symbol

Name
ID
Fkbp9
FK506 binding protein 9
MGI:1350921
Synonyms
FKBP60, FKBP63
Feature Type
protein coding gene
Genetic Map
Chromosome 6
27.74 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr6:56832059-56879358 bp, + strand
From VEGA annotation of GRCm38

  47300 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:31434  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: Fkbp9

Human
homologs
Human Homolog FKBP9, FK506 binding protein 9, 63 kDa
NCBI Gene ID 11328
neXtProt AC  NX_O95302
Human Synonyms  FKBP60, FKBP63, PPIase
Human Chr (Location)  7p11.1; chr7:32957404-33006931 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(23) : Gene trapped(19) Targeted(4)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Fkbp9 interacts with 187 markers (Mir10b, Mir18, Mir27a, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process chaperone-mediated protein folding, protein folding, ...
Component endoplasmic reticulum, endoplasmic reticulum membrane
Function calcium ion binding, FK506 binding, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (198)    Tissues (50)    Images (25)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 186
Northern blot 12
cDNA source data(7)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(7) cDNA(7)
Microarray probesets(4)
Other database
links
VEGA Gene ModelOTTMUSG00000022504 (Evidence)
Ensembl Gene ModelENSMUSG00000029781 (Evidence)
Entrez Gene27055 (Evidence)
DFCITC1573492, TC1738070
DoTSDT.94373181, DT.494331
NIA Mouse Gene IndexU006916
EC5.2.1.8
Consensus CDS ProjectCCDS39494.1
International Mouse Knockout Project StatusFkbp9
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000022504 VEGA Gene Model | MGI Sequence Detail 47300 C57BL/6J ±  kb
transcript OTTMUST00000053877 VEGA | MGI Sequence Detail 3009 Not Applicable 
polypeptide OTTMUSP00000025644 VEGA | MGI Sequence Detail 570 Not Applicable 

For the selected sequences
All sequences(54) RefSeq(2) UniProt(1)
Polymorphisms
SNPs within 2kb(462 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR018247 EF-Hand 1, calcium-binding site
InterPro IPR002048 EF-hand domain
InterPro IPR011992 EF-hand-like domain
InterPro IPR023566 Peptidyl-prolyl cis-trans isomerase, FKBP-type
InterPro IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain
Protein Ontology PR:000007545 peptidyl-prolyl cis-trans isomerase FKBP9
References
(Earliest) J:57457 Shadidy M, et al., Biochemical analysis of mouse FKBP60, a novel member of the FKPB family. Biochim Biophys Acta. 1999 Sep 3;1446(3):295-307
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(37)
Other
accession IDs
MGI:2141694

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
12/16/2014
MGI 5.20
The Jackson Laboratory