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Omd Gene Detail
Summary
  • Symbol
    Omd
  • Name
    osteomodulin
  • Synonyms
    OSAD, osteoadherin, SLRR2C
  • Feature Type
    protein coding gene
  • IDs
    MGI:1350918
    NCBI Gene: 27047
  • Alliance
  • Transcription Start Sites
    5 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:49735938-49746088 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 13, 25.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1350918
protein coding gene Chr13:49735938-49746298 (+)
129S1/SvImJ MGP_129S1SvImJ_G0020539
protein coding gene Chr13:48563169-48574519 (+)
A/J MGP_AJ_G0020493
protein coding gene Chr13:46838686-46865427 (+)
AKR/J MGP_AKRJ_G0020470
protein coding gene Chr13:48162100-48180051 (+)
BALB/cJ MGP_BALBcJ_G0020489
protein coding gene Chr13:47058680-47067753 (+)
C3H/HeJ MGP_C3HHeJ_G0020288
protein coding gene Chr13:47988021-47997104 (+)
C57BL/6NJ MGP_C57BL6NJ_G0020922
protein coding gene Chr13:50027911-50037622 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0018507
protein coding gene Chr13:44814714-44823461 (+)
CAST/EiJ MGP_CASTEiJ_G0019803
protein coding gene Chr13:48000052-48011002 (+)
CBA/J MGP_CBAJ_G0020249
protein coding gene Chr13:52100533-52111108 (+)
DBA/2J MGP_DBA2J_G0020371
protein coding gene Chr13:46365390-46374387 (+)
FVB/NJ MGP_FVBNJ_G0020350
protein coding gene Chr13:45891330-45903530 (+)
LP/J MGP_LPJ_G0020446
protein coding gene Chr13:48784806-48795845 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0020379
protein coding gene Chr13:51794991-51810712 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0020965
protein coding gene Chr13:47857625-47866783 (+)
PWK/PhJ MGP_PWKPhJ_G0019559
protein coding gene Chr13:46553915-46564032 (+)
SPRET/EiJ MGP_SPRETEiJ_G0019387
protein coding gene Chr13:46564187-46574295 (+)
WSB/EiJ MGP_WSBEiJ_G0019865
protein coding gene Chr13:48183884-48197102 (+)



Homology
more
  • Human Ortholog
    OMD, osteomodulin
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OMD, osteomodulin
  • Synonyms
    OSAD, SLRR2C
  • Links
    NCBI Gene ID: 4958
    neXtProt AC: NX_Q99983
    UniProt: Q99983

  • Chr Location
    9q22.31; chr9:92412380-92424471 (-)  GRCh38

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype from multigenic genotypes
    11 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous mutation of this gene results in impaired cued contextual conditioning behavior.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 27047 NCBI Gene Model | MGI Sequence Detail 10151 C57BL/6J ±  kb
transcript NM_012050 RefSeq | MGI Sequence Detail 2039 C57BL/6  
polypeptide O35103 UniProt | EBI | MGI Sequence Detail 423 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 14
    cDNA 14

    Microarray probesets 3
References
more
  • Summaries
    All 36
    Developmental Gene Expression 2
    Gene Ontology 3
    Phenotypes 11
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:342336 Davaapil H, et al., PRELP secreted from mural cells protects the function of blood brain barrier through regulation of endothelial cell-cell integrity. Front Cell Dev Biol. 2023;11:1147625

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
03/12/2024
MGI 6.23
The Jackson Laboratory