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St6galnac5 Gene Detail
Summary
  • Symbol
    St6galnac5
  • Name
    ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
  • Synonyms
    Siat7e, ST6GalNAc V
  • Feature Type
    protein coding gene
  • IDs
    MGI:1349471
    NCBI Gene: 26938
Location & Maps
more
  • Sequence Map
    Chr3:152817081-152982246 bp, - strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      165166 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 3, 77.16 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    ST6GALNAC5, ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
  • Vertebrate Orthologs
    10
  • Human Ortholog
    ST6GALNAC5, ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
    Orthology source: HGNC, HomoloGene
  • Synonyms
    SIAT7E, SIAT7-E, ST6GalNAcV
  • Links
    NCBI Gene ID: 81849
    neXtProt AC: NX_Q9BVH7

  • Chr Location
    1p31.1; chr1:76867441-77069167 (+)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    2
  • Targeted
    2
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000030537 VEGA Gene Model | MGI Sequence Detail 165166 C57BL/6J ±  kb
transcript OTTMUST00000075588 VEGA | MGI Sequence Detail 5667 Not Applicable  
polypeptide OTTMUSP00000039661 VEGA | MGI Sequence Detail 335 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    693 from dbSNP Build 142
Protein
Information
less
  • UniProt
    4 Sequences
  • Protein Ontology
    PR:000015691 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
  • EC
  • InterPro Domains
    IPR001675 Glycosyl transferase family 29
Molecular
Reagents
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  • All nucleic 15
    cDNA 15

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139825
References
more
  • Summaries
    All 29
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 3
  • Earliest
    J:58142 Okajima T, et al., Molecular cloning of brain-specific GD1alpha synthase (ST6GalNAc V) containing CAG/Glutamine repeats [published erratum appears in J Biol Chem 2000 Jan 14;275(2):1520]. J Biol Chem. 1999 Oct 22;274(43):30557-62
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
06/22/2016
MGI 6.04
The Jackson Laboratory