B3galt2
Gene Detail

Symbol Name ID

B3galt2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 MGI:1349461

Feature Type

protein coding gene

Genetic Map

Chromosome 1

62.52 cM, cytoband F
Detailed Genetic Map ± 1 cM


Mapping data(2)

Sequence Map

Chr1:143640664-143650406 bp, + strand From VEGA annotation of GRCm38   9743 bp   ±  kb flank VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer

Mouse Genome Browser

Mammalian homology

human; rat; cattle; chimpanzee; dog, domestic    (Mammalian Orthology)
Comparative Map (Mouse/Human B3galt2 ± 2 cM)

Gene Tree: B3galt2

Human ortholog

B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2 NCBI Gene ID 8707
Human Synonyms: beta3Gal-T2, BETA3GALT2, GLCT2
Human Chr1:193147860-193155743 bp, - strand Reference GRCh37.p2 Primary Assembly

Alleles and phenotypes

All alleles(2) : Targeted(2)
 

Homozygous mice for a targeted mutation display hyperactivity, impaired motor coordination, decreased anxiety, increased startle reflexes, and decreased coping response.

 

Gene Ontology (GO) classifications

All GO classifications: (10 annotations)

Process	oligosaccharide biosynthetic process, protein glycosylation
Component	Golgi apparatus, integral to membrane, ...
Function	galactosyltransferase activity, transferase activity, ...

External Resources: FuncBase

Expression

Literature Summary: (4 records)
Data Summary: Results (577)    Tissues (218)    Images (171)
Theiler Stages: 22, 23, 26, 28

Assay Type	Results
RNA in situ	326
In situ reporter (knock in)	206
Northern blot	7
RT-PCR	38

cDNA source data(8)
External Resources: Allen Institute   GENSAT   GEO   ArrayExpress

Molecular reagents

All nucleic(12) cDNA(9) Primer pair(3)
Microarray probesets(5)

Other database links

VEGA Gene Model	OTTMUSG00000030947 (Evidence)
Ensembl Gene Model	ENSMUSG00000033849 (Evidence)
Entrez Gene	26878 (Evidence)
DFCI	TC1577996, TC1602915
DoTS	DT.485365
NIA Mouse Gene Index	U000888
EC	2.4.1.-
Consensus CDS Project	CCDS15342.1
International Mouse Knockout Project Status	B3galt2

Sequences

Length	Strain/Species
genomic	OTTMUSG00000030947	VEGA Gene Model | MGI Sequence Detail	9743	C57BL/6J
transcript	OTTMUST00000076604	VEGA | MGI Sequence Detail	5080	Not Applicable
polypeptide	OTTMUSP00000040361	VEGA | MGI Sequence Detail	422	Not Applicable

All sequences(26) RefSeq(2) UniProt(1)

Polymorphisms

SNPs(22 from dbSNP Build 128)

Protein-related information

Resource	ID	Description
InterPro	IPR002659	Glycosyl transferase, family 31
Protein Ontology	PR:000004584	beta-1,3-galactosyltransferase 2

References

(Earliest) J:45045 Hennet T, et al., Genomic cloning and expression of three murine UDP-galactose: beta-N-acetylglucosamine beta1,3-galactosyltransferase genes. J Biol Chem. 1998 Jan 2;273(1):58-65
(Latest) J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
All references(28)