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B3galt2 Gene Detail
Summary
  • Symbol
    B3galt2
  • Name
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1349461
    NCBI Gene: 26878
  • Alliance
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:143640697-143649937 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 1, 62.52 cM, cytoband F
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    35 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1349461
protein coding gene Chr1:143640664-143654614 (.)
129S1/SvImJ MGP_129S1SvImJ_G0016561
protein coding gene Chr1:147991206-148006681 (+)
A/J MGP_AJ_G0016544
protein coding gene Chr1:142081534-142095471 (+)
AKR/J MGP_AKRJ_G0016509
protein coding gene Chr1:146438534-146452598 (+)
BALB/cJ MGP_BALBcJ_G0016504
protein coding gene Chr1:142504697-142518958 (+)
C3H/HeJ MGP_C3HHeJ_G0016329
protein coding gene Chr1:146559164-146573105 (+)
C57BL/6NJ MGP_C57BL6NJ_G0016965
protein coding gene Chr1:152984641-152999818 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0014674
protein coding gene Chr1:134905322-134919177 (+)
CAST/EiJ MGP_CASTEiJ_G0015908
protein coding gene Chr1:145981999-145993793 (+)
CBA/J MGP_CBAJ_G0016303
protein coding gene Chr1:158411126-158432269 (+)
DBA/2J MGP_DBA2J_G0016409
protein coding gene Chr1:141187429-141202756 (+)
FVB/NJ MGP_FVBNJ_G0016407
protein coding gene Chr1:139683827-139697752 (+)
LP/J MGP_LPJ_G0016480
protein coding gene Chr1:149006811-149023401 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0016433
protein coding gene Chr1:164851920-164868233 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0017001
protein coding gene Chr1:146177888-146191673 (+)
PWK/PhJ MGP_PWKPhJ_G0015694
protein coding gene Chr1:140096839-140109403 (+)
SPRET/EiJ MGP_SPRETEiJ_G0015481
protein coding gene Chr1:144974926-144988691 (+)
WSB/EiJ MGP_WSBEiJ_G0015971
protein coding gene Chr1:146214746-146228415 (+)



Homology
more
  • Human Ortholog
    B3GALT2, beta-1,3-galactosyltransferase 2
  • Vertebrate Orthologs
    10
  • Human Ortholog
    B3GALT2, beta-1,3-galactosyltransferase 2
    Orthology source: HGNC, HomoloGene
  • Synonyms
    beta3Gal-T2, BETA3GALT2, GLCT2
  • Links
    NCBI Gene ID: 8707
    neXtProt AC: NX_O43825
    UniProt: O43825

  • Chr Location
    1q31.2; chr1:193178730-193186613 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    6 phenotypes from 1 allele in 1 genetic background
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Homozygous mice for a targeted mutation display hyperactivity, impaired motor coordination, decreased anxiety, increased startle reflexes, and decreased coping response.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 26878 NCBI Gene Model | MGI Sequence Detail 9241 C57BL/6J ±  kb
    transcript NM_020025 RefSeq | MGI Sequence Detail 4578 C57BL/6  
    polypeptide O54905 UniProt | EBI | MGI Sequence Detail 422 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 28
      cDNA 25
      Primer pair 3

      Microarray probesets 5
    References
    more
    • Summaries
      All 33
      Developmental Gene Expression 5
      Gene Ontology 7
      Phenotypes 6
    • Earliest
      J:45045 Hennet T, et al., Genomic cloning and expression of three murine UDP-galactose: beta-N-acetylglucosamine beta1,3-galactosyltransferase genes. J Biol Chem. 1998 Jan 2;273(1):58-65
    • Latest
      J:242651 Kim SK, et al., Strain survey and genetic analysis of vasoreactivity in mouse aorta. Physiol Genomics. 2016 Oct 07;:physiolgenomics.00054.2016

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    12/04/2018
    MGI 6.13
    The Jackson Laboratory