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Vsnl1 Gene Detail
Summary
  • Symbol
    Vsnl1
  • Name
    visinin-like 1
  • Synonyms
    VILIP
  • Feature Type
    protein coding gene
  • IDs
    MGI:1349453
    NCBI Gene: 26950
  • Gene Overview
    MyGene.info: VSNL1
Location & Maps
more
  • Sequence Map
    Chr12:11325247-11436649 bp, - strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      111403 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 5.58 cM, cytoband A2
  • Mapping Data
    3 experiments
Homology
more
  • Human Ortholog
    VSNL1, visinin like 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    VSNL1, visinin like 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HLP3, HPCAL3, HUVISL1, VILIP, VILIP-1
  • Links
    NCBI Gene ID: 7447
    neXtProt AC: NX_P62760

  • Chr Location
    2p24.3; chr2:17540540-17656439 (+)  GRCh38.p2
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    5
  • Gene trapped
    1
  • Targeted
    4
  • Incidental Mutations
    Mutagenetix , APF
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    266
  • Tissues
    140
  • cDNA Data
    30
  • Literature Summary
    6
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000054459 Ensembl Gene Model | MGI Sequence Detail 111403 C57BL/6J ±  kb
transcript ENSMUST00000072299 Ensembl | MGI Sequence Detail 1934 Not Applicable  
polypeptide ENSMUSP00000072145 Ensembl | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    590 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 34
    cDNA 30
    Primer pair 2
    Other 2

    Microarray probesets 5
References
more
  • Summaries
    All 35
    Developmental Gene Expression 6
    Gene Ontology 3
    Phenotypes 8
  • Earliest
    J:58153 Mathisen PM, et al., Visinin-like protein (VILIP) is a neuron-specific calcium-dependent double-stranded RNA-binding protein. J Biol Chem. 1999 Oct 29;274(44):31571-6
  • Latest
    J:210997 Ihermann-Hella A, et al., Mitogen-activated protein kinase (MAPK) pathway regulates branching by remodeling epithelial cell adhesion. PLoS Genet. 2014 Mar;10(3):e1004193
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/20/2016
MGI 6.05 		The Jackson Laboratory