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Ctsj Gene Detail
Summary
  • Symbol
    Ctsj
  • Name
    cathepsin J
  • Synonyms
    Cat P, CATP, CatRLP, Ctsp, rat gene/Cathepsin L-related protein
  • Feature Type
    protein coding gene
  • IDs
    MGI:1349426
    NCBI Gene: 26898
  • Alliance
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:61000179-61005925 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 13, 32.62 cM
  • Mapping Data
    5 experiments
Strain
Comparison
more
  • SNPs within 2kb
    98 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1349426
protein coding gene Chr13:61000179-61005959 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020656
protein coding gene Chr13:60776524-60782161 (-)
A/J MGP_AJ_G0020611
protein coding gene Chr13:58488930-58494553 (-)
AKR/J MGP_AKRJ_G0020586
protein coding gene Chr13:60224126-60229762 (-)
BALB/cJ MGP_BALBcJ_G0020607
protein coding gene Chr13:58742249-58747889 (-)
C3H/HeJ MGP_C3HHeJ_G0020404
protein coding gene Chr13:60031475-60037102 (-)
C57BL/6NJ MGP_C57BL6NJ_G0021041
protein coding gene Chr13:62585231-62590867 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018623
protein coding gene Chr13:56322797-56328399 (-)
CAST/EiJ MGP_CASTEiJ_G0019920
protein coding gene Chr13:60264187-60269835 (-)
CBA/J MGP_CBAJ_G0020364
protein coding gene Chr13:64937804-64943439 (-)
DBA/2J MGP_DBA2J_G0020488
protein coding gene Chr13:58032459-58038092 (-)
FVB/NJ MGP_FVBNJ_G0020466
protein coding gene Chr13:57527327-57532959 (-)
LP/J MGP_LPJ_G0020564
protein coding gene Chr13:61000896-61006518 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020496
protein coding gene Chr13:64206850-64212486 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0021084
protein coding gene Chr13:59844747-59850373 (-)
PWK/PhJ MGP_PWKPhJ_G0019673
protein coding gene Chr13:58057480-58063184 (-)
SPRET/EiJ MGP_SPRETEiJ_G0019502
protein coding gene Chr13:58739252-58744897 (-)
WSB/EiJ MGP_WSBEiJ_G0019981
protein coding gene Chr13:60306402-60312034 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 26898 NCBI Gene Model | MGI Sequence Detail 5747 C57BL/6J ±  kb
transcript NM_001356291 RefSeq | MGI Sequence Detail 1387 C57BL/6  
polypeptide Q9R014 UniProt | EBI | MGI Sequence Detail 334 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 88
    cDNA 87
    Primer pair 1

    Microarray probesets 3
Other
Accession IDs
less
MGI:1349662
References
more
  • Summaries
    All 36
    Developmental Gene Expression 4
    Gene Ontology 4
    Phenotypes 5
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:209833 Kim J, et al., Peg3 mutational effects on reproduction and placenta-specific gene families. PLoS One. 2013;8(12):e83359

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB), Gene Ontology (GO)
Citing These Resources
Funding Information
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last database update
02/18/2020
MGI 6.14
The Jackson Laboratory