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Pnck
Gene Detail
Symbol

Name
ID
Pnck
pregnancy upregulated non-ubiquitously expressed CaM kinase
MGI:1347357
Synonyms
Bstk3, Camk1b, CaMKIbeta2, Punc
Feature Type
protein coding gene
Genetic Map
Chromosome X
37.38 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:73655994-73660117 bp, - strand
From VEGA annotation of GRCm38

  4124 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:128728  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 western clawed frog; 1 zebrafish

Protein SuperFamily: kinase-related transforming protein
Gene Tree: Pnck

Human
homologs
Human Homolog PNCK, pregnancy up-regulated nonubiquitous CaM kinase
NCBI Gene ID 139728
neXtProt AC  NX_Q6P2M8
Human Synonyms  BSTK3, CaMK1b
Human Chr (Location)  Xq28; chrX:153669733-153686683 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Interactions
Pnck interacts with 60 markers (Mir15a, Mir18, Mir18b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (16 annotations)
Process phosphorylation, protein phosphorylation
Component calcium- and calmodulin-dependent protein kinase complex, cytoplasm, ...
Function ATP binding, calmodulin binding, ...
External Resources: FuncBase
Expression
Literature Summary: (6 records)
Data Summary: Results (164)    Tissues (95)    Images (19)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 163
RT-PCR 1
cDNA source data(25)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(27) cDNA(25) Primer pair(2)
Microarray probesets(5)
Other database
links
VEGA Gene ModelOTTMUSG00000017681 (Evidence)
Ensembl Gene ModelENSMUSG00000002012 (Evidence)
Entrez Gene93843 (Evidence)
UniGene89564
DFCITC1582285, TC1652462
DoTSDT.101357086, DT.111033797, DT.524713
NIA Mouse Gene IndexU039455
EC2.7.11.17
Consensus CDS ProjectCCDS30207.1
International Mouse Knockout Project StatusPnck
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017681 VEGA Gene Model | MGI Sequence Detail 4124 C57BL/6J ±  kb
transcript OTTMUST00000043444 VEGA | MGI Sequence Detail 1532 Not Applicable 
polypeptide OTTMUSP00000019517 VEGA | MGI Sequence Detail 343 Not Applicable 

For the selected sequences
All sequences(53) RefSeq(13) UniProt(4)
Polymorphisms
RFLP(1) : SNPs within 2kb(7 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR020636 Calcium/calmodulin-dependent/calcium-dependent protein kinase
InterPro IPR017441 Protein kinase, ATP binding site
InterPro IPR000719 Protein kinase, catalytic domain
InterPro IPR011009 Protein kinase-like domain
InterPro IPR002290 Serine/threonine- / dual specificity protein kinase, catalytic domain
InterPro IPR008271 Serine/threonine-protein kinase, active site
Protein Ontology PR:000012923 calcium/calmodulin-dependent protein kinase type 1B
References
(Earliest) J:44157 Chodosh LA, et al., Mammary gland development, reproductive history, and breast cancer risk. Cancer Res. 1999 Apr 1;59(7 Suppl):1765-1771s; discussion 1771s-1
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(36)
Other
accession IDs
MGI:1349655

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory