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Atp2b3
Gene Detail
Symbol

Name
ID
Atp2b3
ATPase, Ca++ transporting, plasma membrane 3
MGI:1347353
Synonyms
6430519O13Rik, Pmca3
Feature Type
protein coding gene
Genetic Map
Chromosome X
37.33 cM
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
ChrX:73503086-73571005 bp, + strand
From VEGA annotation of GRCm38

  67920 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:123775  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 cattle; 1 dog; 1 western clawed frog; 2 zebrafish

Protein SuperFamily: Na(+)/K(+)-transporting ATPase alpha chain
Gene Tree: Atp2b3

Human
homologs
Human Homolog ATP2B3, ATPase, Ca++ transporting, plasma membrane 3
NCBI Gene ID 492
neXtProt AC  NX_Q16720
Human Synonyms  CFAP39, CLA2, OPCA, PMCA3, PMCA3a, SCAX1
Human Chr (Location)  Xq28; chrX:153518447-153582929 (+)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Interactions
Atp2b3 interacts with 159 markers (Mir7-1, Mir7-2, Mir7b, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Component Golgi apparatus, integral component of membrane, ...
Function ATP binding, hydrolase activity, ...
External Resources: FuncBase
Expression
Literature Summary: (4 records)
Data Summary: Results (99)    Tissues (95)    Images (14)    Tissue x Stage Matrix (view)
Assay TypeResults
RNA in situ 94
Western blot 5
cDNA source data(9)
External Resources: Allen Institute   GEO   Expression Atlas
Molecular
reagents
All nucleic(9) cDNA(9)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000017670 (Evidence)
Ensembl Gene ModelENSMUSG00000031376 (Evidence)
Entrez Gene320707 (Evidence)
UniGene210095
DFCITC1586624, TC1607037, TC1688118
DoTSDT.111038900, DT.55280526, DT.91356825, DT.91376256
NIA Mouse Gene IndexU019938
Consensus CDS ProjectCCDS30205.1
International Mouse Knockout Project StatusAtp2b3
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017670 VEGA Gene Model | MGI Sequence Detail 67920 C57BL/6J ±  kb
transcript OTTMUST00000042868 VEGA | MGI Sequence Detail 4483 Not Applicable 
polypeptide OTTMUSP00000019255 VEGA | MGI Sequence Detail 1220 Not Applicable 

For the selected sequences
All sequences(50) RefSeq(16) UniProt(4)
Polymorphisms
SNPs within 2kb(206 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR022141 Calcium transporting P-type ATPase, C-terminal, plasma membrane
InterPro IPR006408 Calcium-transporting P-type ATPase, subfamily IIB
InterPro IPR001757 Cation-transporting P-type ATPase
InterPro IPR006068 Cation-transporting P-type ATPase, C-terminal
InterPro IPR004014 Cation-transporting P-type ATPase, N-terminal
InterPro IPR023214 HAD-like domain
InterPro IPR008250 P-type ATPase, A domain
InterPro IPR023299 P-type ATPase, cytoplasmic domain N
InterPro IPR018303 P-type ATPase, phosphorylation site
InterPro IPR023298 P-type ATPase, transmembrane domain
Protein Ontology PR:000004447 plasma membrane calcium-transporting ATPase 3
References
(Earliest) J:57237 Zacharias DA, et al., Developmental expression of the four plasma membrane calcium ATPase (Pmca) genes in the mouse. Biochim Biophys Acta. 1999 Aug 5;1428(2-3):397-405
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(31)
Other
accession IDs
MGI:2444577

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
10/08/2014
MGI 5.20
The Jackson Laboratory