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Cetn1 Gene Detail
Summary
  • Symbol
    Cetn1
  • Name
    centrin 1
  • Feature Type
    protein coding gene
  • IDs
    MGI:1347086
    NCBI Gene: 26369
  • Gene Overview
    MyGene.info: CETN1
  • Alliance
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr18:9618419-9619469 bp, - strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 18, 4.91 cM, cytoband A2
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    11 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1347086
protein coding gene Chr18:9615524-9619478 (-)
129S1/SvImJ MGP_129S1SvImJ_G0024141
protein coding gene Chr18:6541356-6545199 (-)
A/J MGP_AJ_G0024103
protein coding gene Chr18:6499733-6504782 (-)
AKR/J MGP_AKRJ_G0024070
protein coding gene Chr18:6657765-6663486 (-)
BALB/cJ MGP_BALBcJ_G0024102
protein coding gene Chr18:6477539-6481715 (-)
C3H/HeJ MGP_C3HHeJ_G0023869
protein coding gene Chr18:6545764-6551022 (-)
C57BL/6NJ MGP_C57BL6NJ_G0024547
protein coding gene Chr18:6930027-6936781 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0021986
protein coding gene Chr18:6053790-6057652 (-)
CAST/EiJ MGP_CASTEiJ_G0023346
protein coding gene Chr18:6516678-6520544 (-)
CBA/J MGP_CBAJ_G0023841
protein coding gene Chr18:6922857-6926726 (-)
DBA/2J MGP_DBA2J_G0023970
protein coding gene Chr18:6353001-6357379 (-)
FVB/NJ MGP_FVBNJ_G0023935
protein coding gene Chr18:6319832-6324774 (-)
LP/J MGP_LPJ_G0024053
protein coding gene Chr18:6617076-6620946 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0023964
protein coding gene Chr18:7124313-7129380 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0024593
protein coding gene Chr18:6497946-6502978 (-)
PWK/PhJ MGP_PWKPhJ_G0023091
protein coding gene Chr18:6385419-6389638 (-)
SPRET/EiJ MGP_SPRETEiJ_G0022902
protein coding gene Chr18:6802739-6806582 (-)
WSB/EiJ MGP_WSBEiJ_G0023412
protein coding gene Chr18:6481062-6485048 (-)



Homology
more
  • Human Ortholog
    CETN1, centrin 1
  • Vertebrate Orthologs
    9
  • Human Ortholog
    CETN1, centrin 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    CEN1, CETN
  • Links
    NCBI Gene ID: 1068
    neXtProt AC: NX_Q12798
    UniProt: Q12798

  • Chr Location
    18p11.32; chr18:580343-582020 (+)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 26369 NCBI Gene Model | MGI Sequence Detail 1051 C57BL/6J ±  kb
transcript NM_007593 RefSeq | MGI Sequence Detail 1051 C57BL/6  
polypeptide P41209 UniProt | EBI | MGI Sequence Detail 172 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 98
    Genomic 2
    cDNA 96

    Microarray probesets 6
References
more
  • Summaries
    All 36
    Developmental Gene Expression 3
    Gene Ontology 11
    Phenotypes 1
  • Earliest
    J:15453 Ogawa K, et al., cDNA sequence for mouse caltractin. Biochim Biophys Acta. 1993 Oct 19;1216(1):126-8
  • Latest
    J:263267 Serjanov D, et al., Laminin beta2 Chain Regulates Retinal Progenitor Cell Mitotic Spindle Orientation via Dystroglycan. J Neurosci. 2018 Jun 27;38(26):5996-6010

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
11/06/2018
MGI 6.13
The Jackson Laboratory