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Zfp260 Gene Detail
Summary
  • Symbol
    Zfp260
  • Name
    zinc finger protein 260
  • Synonyms
    Ozrf1, PEX1, Zfp63
  • Feature Type
    protein coding gene
  • IDs
    MGI:1347071
    NCBI Gene: 26466
  • Alliance
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:30094782-30107622 bp, + strand
  • From NCBI annotation of GRCm38

    View this region in JBrowse

  • Genome Browsers
  • Genetic Map
    Chromosome 7, 17.26 cM
  • Mapping Data
    6 experiments
Strain
Comparison
more
  • SNPs within 2kb
    227 from dbSNP Build 142
  • Strain Annotations
    18
  • RFLP
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1347071
protein coding gene Chr7:30094777-30107622 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032000
protein coding gene Chr7:29057921-29070886 (+)
A/J MGP_AJ_G0031977
protein coding gene Chr7:28301604-28314079 (+)
AKR/J MGP_AKRJ_G0031910
protein coding gene Chr7:29018099-29031421 (+)
BALB/cJ MGP_BALBcJ_G0031984
protein coding gene Chr7:28474900-28487504 (+)
C3H/HeJ MGP_C3HHeJ_G0031703
protein coding gene Chr7:29468324-29481060 (+)
C57BL/6NJ MGP_C57BL6NJ_G0032449
protein coding gene Chr7:29994637-30009854 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0029500
protein coding gene Chr7:29328044-29342851 (+)
CAST/EiJ MGP_CASTEiJ_G0031037
protein coding gene Chr7:22700182-22715137 (+)
CBA/J MGP_CBAJ_G0031669
protein coding gene Chr7:31449312-31463644 (+)
DBA/2J MGP_DBA2J_G0031821
protein coding gene Chr7:28027807-28040738 (+)
FVB/NJ MGP_FVBNJ_G0031778
protein coding gene Chr7:28145735-28158818 (+)
LP/J MGP_LPJ_G0031902
protein coding gene Chr7:29386828-29400276 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0031814
protein coding gene Chr7:30712200-30731598 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0032478
protein coding gene Chr7:28508615-28525172 (+)
PWK/PhJ MGP_PWKPhJ_G0030763
protein coding gene Chr7:23055663-23068937 (+)
SPRET/EiJ MGP_SPRETEiJ_G0030596
protein coding gene Chr7:19506628-19521559 (+)
WSB/EiJ MGP_WSBEiJ_G0031147
protein coding gene Chr7:28898765-28911231 (+)



Homology
more
  • Human Ortholog
    ZNF260, zinc finger protein 260
  • Vertebrate Orthologs
    5
  • Human Ortholog
    ZNF260, zinc finger protein 260
    Orthology source: HomoloGene, HGNC
  • Synonyms
    OZRF1, PEX1, ZFP260
  • Links
    NCBI Gene ID: 339324
    neXtProt AC: NX_Q3ZCT1
    UniProt: Q3ZCT1

  • Chr Location
    19q13.12; chr19:36510687-36528488 (-)  GRCh38.p7

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotypes from 1 allele in 1 genetic background
    7 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
immune system
integument
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
neoplasm
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell death
cell differentiation
cell population proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
nucleic acid-templated transcription
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
  • Tissues
  • cDNA Data
  • Literature Summary
  • Comparison Matrix
  • Interactions
    less
    Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 26466 NCBI Gene Model | MGI Sequence Detail 12841 C57BL/6J ±  kb
    transcript NM_011981 RefSeq | MGI Sequence Detail 3851 C57BL/6  
    polypeptide Q62513 UniProt | EBI | MGI Sequence Detail 407 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 79
      Genomic 1
      cDNA 77
      Primer pair 1

      Microarray probesets 9
    Other
    Accession IDs
    less
    MGD-MRK-16446, MGI:2141984, MGI:99661
    References
    more
    • Summaries
      All 37
      Developmental Gene Expression 5
      Gene Ontology 3
      Phenotypes 7
    • Earliest
      J:26632 Danciger M, et al., Chromosomal localization of the genes for five zinc finger proteins expressed in mouse lens. Genomics. 1995 Jul 1;28(1):39-43
    • Latest
      J:236599 Dickinson ME, et al., High-throughput discovery of novel developmental phenotypes. Nature. 2016 Sep 14;537(7621):508-514

    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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    last database update
    03/13/2019
    MGI 6.13
    The Jackson Laboratory