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Psma4 Gene Detail
Summary
  • Symbol
    Psma4
  • Name
    proteasome (prosome, macropain) subunit, alpha type 4
  • Synonyms
    C9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1347060
    NCBI Gene: 26441
  • Gene Overview
    MyGene.info: PSMA4
Location & Maps
more
  • Sequence Map
    Chr9:54950790-54958030 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser
  • Download
    Sequence
      7241 bp   ±  kb flank

  • Genome Browsers
    VEGA | Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 9, 29.84 cM, cytoband C
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    PSMA4, proteasome subunit alpha 4
  • Vertebrate Orthologs
    9
  • Human Ortholog
    PSMA4, proteasome subunit alpha 4
    Orthology source: HomoloGene, HGNC
  • Synonyms
    HC9, HsT17706, PSC9
  • Links
    NCBI Gene ID: 5685
    neXtProt AC: NX_P25789

  • Chr Location
    15q25.1; chr15:78540405-78549220 (+)  GRCh38.p2
  • HomoloGene
    Vertebrate Homology Class 2083
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 chicken;1 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: PSMA4
  • Gene Tree
    Psma4
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    8
  • Gene trapped
    5
  • Targeted
    3
  • Incidental Mutations
    CvDC
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
    177
  • Literature Summary
    2
  • Other Mouse Links
    GEO
  • Other Vertebrate Links
    Xenbase psma4
    ZFIN psma4
Interactions
less
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000036073 VEGA Gene Model | MGI Sequence Detail 7241 C57BL/6J ±  kb
transcript OTTMUST00000092675 VEGA | MGI Sequence Detail 1165 Not Applicable  
polypeptide OTTMUSP00000051281 VEGA | MGI Sequence Detail 261 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    107 from dbSNP Build 142
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 177
    cDNA 177

    Microarray probesets 3
References
more
  • Summaries
    All 32
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 4
  • Earliest
    J:57232 Elenich LA, et al., The complete primary structure of mouse 20S proteasomes. Immunogenetics. 1999 Sep;49(10):835-42
  • Latest
    J:228828 Hamazaki J, et al., Redundant Roles of Rpn10 and Rpn13 in Recognition of Ubiquitinated Proteins and Cellular Homeostasis. PLoS Genet. 2015 Jul;11(7):e1005401
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
09/20/2016
MGI 6.05 		The Jackson Laboratory