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Sema4g
Gene Detail
 Symbol
Name
ID
Sema4g
sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
MGI:1347047
Feature Type protein coding gene
Genetic Map
Chromosome 19
38.16 cM
Detailed Genetic Map ± 1 cM


Mapping data(3)
Sequence Map
Chr19:44989101-45003397 bp, + strand
From VEGA annotation of GRCm38

  14297 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:22682  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 rhesus macaque; 1 cattle; 1 dog; 2 zebrafish

Protein SuperFamily: semaphorin
Gene Tree: Sema4g

Human
homologs
Human Homolog SEMA4G, sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
NCBI Gene ID 57715
neXtProt AC  NX_Q9NTN9
Human Chr (Location)  10q24.31; chr10:100969497-100985616 (+)  GRCh38
Alleles
and
phenotypes
All alleles(12) : Gene trapped(6) Targeted(6)
Incidental mutations (data from Mutagenetix , APF )
 
Mice homozygous for a targeted allele exhibit normal cerebellar morphology.
 
Gene Ontology
(GO)
classifications
All GO classifications: (10 annotations)
Process cell differentiation, multicellular organismal development, ...
Component integral component of membrane, membrane, ...
Function protein binding, receptor activity
External Resources: FuncBase
Expression
Literature Summary: (11 records)
Data Summary: Results (313)    Tissues (102)    Images (43)
Theiler Stages: 13, 14, 15, 17, 20, 22, 23, 24, 26, 28
Assay TypeResults
RNA in situ 304
Northern blot 9
cDNA source data(73)
External Resources: Allen Institute   GEO   ArrayExpress
Molecular
reagents
All nucleic(74) cDNA(74)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000014898 (Evidence)
Ensembl Gene ModelENSMUSG00000025207 (Evidence)
Entrez Gene26456 (Evidence)
UniGene34404
DFCITC1579617, TC1601644, TC1603019
DoTSDT.101336834, DT.527985, DT.94337269
NIA Mouse Gene IndexU019495
Consensus CDS ProjectCCDS29853.1
International Mouse Knockout Project StatusSema4g
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000014898 VEGA Gene Model | MGI Sequence Detail 14297 C57BL/6J ±  kb
transcript OTTMUST00000035392 VEGA | MGI Sequence Detail 4548 Not Applicable 
polypeptide OTTMUSP00000015815 VEGA | MGI Sequence Detail 837 Not Applicable 

For the selected sequences
All sequences(39) RefSeq(6) UniProt(2)
Polymorphisms SNPs within 2kb(66 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR007110 Immunoglobulin-like domain
InterPro IPR013783 Immunoglobulin-like fold
InterPro IPR003599 Immunoglobulin subtype
InterPro IPR002165 Plexin
InterPro IPR016201 Plexin-like fold
InterPro IPR027231 Semaphorin
InterPro IPR001627 Semaphorin/CD100 antigen
InterPro IPR015943 WD40/YVTN repeat-like-containing domain
Protein Ontology PR:000014626 semaphorin-4G
References (Earliest) J:57796 Li H, et al., Characterization and expression of sema4g, a novel member of the semaphorin gene family. Mech Dev. 1999 Sep;87(1-2):169-73
(Latest) J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
All references(44)
Other
accession IDs
MGI:2147576, MGI:2147747

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/15/2014
MGI 5.18
The Jackson Laboratory