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Scamp2 Gene Detail
Summary
  • Symbol
    Scamp2
  • Name
    secretory carrier membrane protein 2
  • Synonyms
    Sc2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1346518
    NCBI Gene: 24044
  • Gene Overview
    MyGene.info: SCAMP2
Location & Maps
more
  • Sequence Map
    Chr9:57560944-57588797 bp, + strand
  • From Ensembl annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      27854 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 9, 31.05 cM
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    SCAMP2, secretory carrier membrane protein 2
  • Vertebrate Orthologs
    11
  • Human Ortholog
    SCAMP2, secretory carrier membrane protein 2
    Orthology source: HomoloGene, HGNC
  • Links
    NCBI Gene ID: 10066
    neXtProt AC: NX_O15127

  • Chr Location
    15q23-q25; chr15:74843730-74873365 (-)  GRCh38.p2

  • HomoloGene
    Vertebrate Homology Class 4163
    1 human;1 mouse;1 rat;1 chimpanzee;1 rhesus macaque;1 cattle;1 dog;1 chicken;2 zebrafish;1 frog, western clawed
  • HCOP
    human homology predictions: SCAMP2
  • Gene Tree
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    10
  • Endonuclease-mediated
    1
  • Gene trapped
    6
  • Targeted
    3
  • Incidental Mutations
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
  • Literature Summary
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000040188 Ensembl Gene Model | MGI Sequence Detail 27854 C57BL/6J ±  kb
transcript ENSMUST00000045791 Ensembl | MGI Sequence Detail 2341 Not Applicable  
polypeptide ENSMUSP00000038350 Ensembl | MGI Sequence Detail 329 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    82 from dbSNP Build 142
Protein
Information
less
  • UniProt
    3 Sequences
  • Protein Ontology
    PR:000014484 secretory carrier-associated membrane protein 2
  • InterPro Domains
    IPR007273 SCAMP
Molecular
Reagents
less
  • All nucleic 18
    cDNA 18

    Microarray probesets 6
Other
Accession IDs
less
MGI:2143165
References
more
  • Summaries
    All 28
    Developmental Gene Expression 1
    Gene Ontology 3
    Phenotypes 6
  • Earliest
    J:43149 Singleton DR, et al., Three mammalian SCAMPs (secretory carrier membrane proteins) are highly related products of distinct genes having similar subcellular distributions. J Cell Sci. 1997 Sep;110(Pt 17):2099-107
  • Latest
    J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/13/2016
MGI 6.05
The Jackson Laboratory