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Sh3bp2 Gene Detail
Summary
  • Symbol
    Sh3bp2
  • Name
    SH3-domain binding protein 2
  • Synonyms
    3BP2
  • Feature Type
    protein coding gene
  • IDs
    MGI:1346349
    NCBI Gene: 24055
  • Alliance
    genome feature page
  • Transcription Start Sites
    13 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:34683182-34720985 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 17.89 cM
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1066 from dbSNP Build 142
  • Strain Annotations
    31
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1346349
 protein coding gene Chr5:34683128-34720985 (+)
129S1/SvImJ ENSMUSG00200011860
 protein coding gene Chr5:30169758-30170682 (+)
129S1/SvImJ ENSMUSGG00200054549
 protein coding gene Chr5:30175969-30190034 (+)
A/J ENSMUSGG00195055063
 protein coding gene Chr5:29647638-29661693 (+)
A/J ENSMUSG00195049101
 protein coding gene Chr5:29641427-29642351 (+)
AKR/J ENSMUSGG00220054798
 protein coding gene Chr5:29668007-29682066 (+)
AKR/J ENSMUSG00220007680
 protein coding gene Chr5:29661797-29662719 (+)
BALB/cJ ENSMUSGG00180055178
 protein coding gene Chr5:29450547-29464608 (+)
BALB/cJ ENSMUSG00180036488
 protein coding gene Chr5:29444334-29445260 (+)
C3H/HeJ ENSMUSG00175019435
 protein coding gene Chr5:31423894-31424818 (+)
C3H/HeJ ENSMUSGG00175054838
 protein coding gene Chr5:31430105-31444165 (+)
C57BL/6NJ ENSMUSG00215005431
 protein coding gene Chr5:30166978-30167902 (+)
C57BL/6NJ ENSMUSGG00215055224
 protein coding gene Chr5:30173189-30187256 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0027134
 protein coding gene Chr5:29463513-29501645 (+)
CAST/EiJ ENSTCUGG00005054138
 protein coding gene Chr5:29644558-29658658 (+)
CBA/J ENSMUSG00210003955
 protein coding gene Chr5:30392739-30393663 (+)
CBA/J ENSMUSGG00210054942
 protein coding gene Chr5:30398950-30413009 (+)
DBA/2J ENSMUSGG00185057621
 protein coding gene Chr5:32267896-32281959 (+)
DBA/2J ENSMUSG00185016518
 protein coding gene Chr5:32261685-32262609 (+)
FVB/NJ ENSMUSGG00205054181
 protein coding gene Chr5:29150199-29164289 (+)
FVB/NJ ENSMUSG00205026759
 protein coding gene Chr5:29144046-29144970 (+)
JF1/MsJ ENSUMUGG00000058574
 protein coding gene Chr5:36863510-36877605 (+)
LP/J ENSMUSGG00230055394
 protein coding gene Chr5:36879633-36893700 (+)
LP/J ENSMUSG00230043221
 protein coding gene Chr5:36873422-36874346 (+)
NOD/ShiLtJ ENSMUSG00190014499
 protein coding gene Chr5:29426138-29427062 (+)
NOD/ShiLtJ ENSMUSGG00190055044
 protein coding gene Chr5:29432289-29446378 (+)
NZO/HlLtJ ENSMUSGG00225055436
 protein coding gene Chr5:42085881-42099942 (+)
NZO/HlLtJ ENSMUSG00225015549
 protein coding gene Chr5:42079670-42080594 (+)
PWK/PhJ ENSLUMGG00010053929
 protein coding gene Chr5:29557950-29572061 (+)
SPRET/EiJ ENSMSPGG00010052270
 protein coding gene Chr5:30750403-30764408 (+)
WSB/EiJ ENSIUOGG00005054147
 protein coding gene Chr5:32358781-32372834 (+)



Homology
more
  • Human Ortholog
    SH3BP2, SH3 domain binding protein 2
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SH3BP2, SH3 domain binding protein 2
  • Synonyms
    3BP-2, 3BP2, CRBM, CRPM, RES4-23
  • Links
    NCBI Gene ID: 6452
    UniProt: P78314

  • Chr Location
    4p16.3; chr4:2793020-2841291 (+)  GRCh38
Human Diseases
more
  • Diseases
    1 with Sh3bp2 mouse models; 1 with human SH3BP2 associations

Human Disease Mouse Models
      
IDs
 View 2 models
Click on a disease name to see all genes associated with that disease.

  • Mutations/Alleles
    2 with disease annotations
  • References
    3 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    70 phenotypes from 6 alleles in 7 genetic backgrounds
    12 phenotypes from multigenic genotypes
    57 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Nullizygous mutations may lead to higher pre-B cell numbers and impaired B cell receptor signaling or thymus-independent type 2 humoral responses. Homozygosity for a knock-in allele causes premature death, enhanced osteoclast differentiation and TNF production, systemic bone loss and inflammation.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    7
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    680
  • Tissues
    9
  • cDNA Data
    34
  • Literature Summary
    1
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000054520 Ensembl Gene Model | MGI Sequence Detail 37804 C57BL/6J ±  kb
    transcript ENSMUST00000118545 Ensembl | MGI Sequence Detail 3034 Not Applicable  
    polypeptide ENSMUSP00000112554 Ensembl | MGI Sequence Detail 615 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 34
      cDNA 34

      Microarray probesets 4
    References
    more
    • Summaries
      All 86
      Developmental Gene Expression 1
      Diseases 3
      Gene Ontology 5
      Phenotypes 57
    • Earliest
      J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
    • Latest
      J:368330 Rabhi BV, et al., The bone phenotype associated with cherubism is independent of Caspase-1-dependent inflammasome activation in the mouse. PLoS One. 2025;20(2):e0318826
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    09/08/2026
    MGI 6.24     		The Jackson Laboratory