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Klf6 Gene Detail
Summary
  • Symbol
    Klf6
  • Name
    Kruppel-like factor 6
  • Synonyms
    BCD1, Copeb, CPBP, FM2, FM6, Ierepo1, Ierepo3, Zf9
  • Feature Type
    protein coding gene
  • IDs
    MGI:1346318
    NCBI Gene: 23849
  • Gene Overview
    MyGene.info: KLF6
  • Alliance
    gene page
Location & Maps
more
  • Genetic Map
    Chromosome 13, 2.94 cM, cytoband A1
  • Mapping Data
    2 experiments
Homology
more
  • Human Ortholog
    KLF6, Kruppel like factor 6
  • Vertebrate Orthologs
    10
  • Human Ortholog
    KLF6, Kruppel like factor 6
    Orthology source: HomoloGene, HGNC
  • Synonyms
    BCD1, CBA1, COPEB, CPBP, GBF, PAC1, ST12, ZF9
  • Links
    NCBI Gene ID: 1316
    neXtProt AC: NX_Q99612
    UniProt: Q99612

  • Chr Location
    10p15.2; chr10:3775996-3785281 (-)  GRCh38.p7
  • HomoloGene
    Vertebrate Homology Class 996
    1 human;1 mouse;1 rat;1 chimpanzee;1 cattle;1 dog;1 chicken;1 zebrafish;1 frog, western clawed;1 macaque, rhesus
  • HCOP
    human homology predictions: KLF6
  • Gene Tree
    Klf6
Human Diseases
more
  • Diseases
    2 with human KLF6 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    13 phenotypes from 2 alleles in 3 genetic backgrounds
    5 phenotypes from multigenic genotypes
    3 images
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a null allele exhibit embryonic lethality during organogenesis, small size, pallor, decreased cellular proliferation and delayed liver development. Mice heterozygous for a null allele exhibit delays in embryonic hematopoeisis.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    20
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    121
  • Tissues
    88
  • cDNA Data
    141
  • Literature Summary
    14
Interactions
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Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic 23849 NCBI Gene Model | MGI Sequence Detail 8905 C57BL/6J ±  kb
transcript NM_011803 RefSeq | MGI Sequence Detail 4217 C57BL/6  
polypeptide O08584 UniProt | EBI | MGI Sequence Detail 283 Not Applicable  
For the selected sequence
Polymorphisms
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  • SNPs within 2kb
    56 from dbSNP Build 142
Protein
Information
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Molecular
Reagents
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  • All nucleic 144
    cDNA 142
    Primer pair 2

    Microarray probesets 6
Other
Accession IDs
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MGI:1932268, MGI:1932273, MGI:2145240, MGI:2145533, MGI:2145544
References
more
  • Summaries
    All 56
    Developmental Gene Expression 14
    Gene Ontology 7
    Phenotypes 14
  • Earliest
    J:56736 Philipsen S, et al., A tale of three fingers: the family of mammalian Sp/XKLF transcription factors. Nucleic Acids Res. 1999 Aug 1;27(15):2991-3000
  • Latest
    J:238742 Hayashi S, et al., Klf5 regulates muscle differentiation by directly targeting muscle-specific genes in cooperation with MyoD in mice. Elife. 2016 Oct 15;5
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/17/2017
MGI 6.10 		The Jackson Laboratory