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Sh3yl1 Gene Detail
Summary
  • Symbol
    Sh3yl1
  • Name
    Sh3 domain YSC-like 1
  • Synonyms
    Ray, YSC84
  • Feature Type
    protein coding gene
  • IDs
    MGI:1346118
    NCBI Gene: 24057
Location & Maps
more
  • Sequence Map
    Chr12:30911668-30960162 bp, + strand
  • From VEGA annotation of GRCm38

    Mouse Genome Browser

  • Download
    Sequence
      48495 bp   ±  kb flank

  • Genome Browsers
  • Genetic Map
    Chromosome 12, 13.01 cM
  • Mapping Data
    1 experiment
Homology
more
  • Human Ortholog
    SH3YL1, SH3 and SYLF domain containing 1
  • Vertebrate Orthologs
    10
  • Human Ortholog
    SH3YL1, SH3 and SYLF domain containing 1
    Orthology source: HomoloGene, HGNC
  • Synonyms
    RAY
  • Links
    NCBI Gene ID: 26751
    neXtProt AC: NX_Q96HL8

  • Chr Location
    2p25.3; chr2:218136-264866 (-)  GRCh38.p2

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
  • All Mutations and Alleles
    1
  • Targeted
    1
  • Incidental Mutations
    APF
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
  • GO References
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
receptor
receptor binding
RNA binding
transcription
transferase
transporter
Biological Process

nucleic acid-templated transcription
carbohydrate derivative metabolism
cell death
cell differentiation
cell proliferation
cellular component organization
establishment of localization
homeostatic process
immune system process
lipid metabolic process
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
non-membrane-bounded organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
synapse
vacuole
Click cells to view annotations.
Expression
less
  • cDNA Data
Interactions
less
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000027535 VEGA Gene Model | MGI Sequence Detail 48495 C57BL/6J ±  kb
transcript OTTMUST00000068181 VEGA | MGI Sequence Detail 1750 Not Applicable  
polypeptide OTTMUSP00000034405 VEGA | MGI Sequence Detail 340 Not Applicable  
For the selected sequence
Polymorphisms
less
  • SNPs within 2kb
    197 from dbSNP Build 142
Protein
Information
less
  • UniProt
    1 Sequence
  • Protein Ontology
    PR:000030844 SH3 domain-containing YSC84-like protein 1
  • InterPro Domains
    IPR001452 SH3 domain
    IPR007461 Ysc84 actin-binding domain
    IPR033643 Ysc84-like 1, SYLF domain
Molecular
Reagents
less
  • All nucleic 42
    cDNA 42

    Microarray probesets 3
Other
Accession IDs
less
MGI:2144784
References
more
  • Summaries
    All 23
    Gene Ontology 3
    Phenotypes 2
  • Earliest
    J:62054 Aoki N, et al., A novel mouse gene, Sh3yl1, is expressed in the anagen hair follicle. J Invest Dermatol. 2000 May;114(5):1050-6
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/27/2016
MGI 6.05
The Jackson Laboratory