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Ctage5
Gene Detail
Symbol

Name
ID
Ctage5
CTAGE family, member 5
MGI:1346056
Synonyms
D12Bwg0579e, MEA6, Mgea, Mgea6
Feature Type
protein coding gene
Genetic Map
Chromosome 12
26.01 cM
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
Chr12:59129720-59191583 bp, + strand
From VEGA annotation of GRCm38

  61864 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4336  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: CTAGE5
Gene Tree: Ctage5

Human
homologs
CTAGE5, CTAGE family, member 5
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 4253
neXtProt AC: NX_O15320

Human Synonyms: MEA6, MGEA, MGEA11, MGEA6

Human Chr (Location): 14q13.3; chr14:39265272-39351193 (+)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(20) : Gene trapped(19) Targeted(1)
Incidental mutations (data from Mutagenetix , APF )
Interactions
Ctage5 interacts with 342 markers (Mir1b, Mir7-1, Mir7-2, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (4 annotations)
Process biological_process
Component integral component of membrane, membrane
Function molecular_function
External Resources: FuncBase
Expression
cDNA source data(11)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase ctage5 ; ZFIN ctage5    NEW 
Molecular
reagents
All nucleic(12) cDNA(11) Primer pair(1)
Microarray probesets(4)
Other database
links
VEGA Gene Model OTTMUSG00000039748 (Evidence)
Ensembl Gene Model ENSMUSG00000021000 (Evidence)
Entrez Gene 217615 (Evidence)
DFCI TC1576485, TC1601876, TC1603588, TC1630551, TC1619831
DoTS DT.97349428, DT.87031890, DT.491602, DT.101379849, DT.101278445, DT.101211653
Consensus CDS Project CCDS36458.2, CCDS49071.1, CCDS56840.1
International Mouse Phenotyping Consortium Status Ctage5
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000039748 VEGA Gene Model | MGI Sequence Detail 61864 C57BL/6J ±  kb
transcript OTTMUST00000103411 VEGA | MGI Sequence Detail 2649 Not Applicable 
polypeptide OTTMUSP00000057769 VEGA | MGI Sequence Detail 805 Not Applicable 

For the selected sequences
All sequences(140) RefSeq(14) UniProt(17)
Polymorphisms
SNPs within 2kb(374 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
Protein Ontology PR:000005992 cTAGE family member 5
References
(Earliest) J:44483 Brady KP, et al., Genetic mapping of 262 loci derived from expressed sequences in a murine interspecific cross using single-strand conformational polymorphism analysis. Genome Res. 1997 Nov;7(11):1085-93
(Latest) J:99680 The FANTOM Consortium and RIKEN Genome Exploration Research Group and Genome Science Group (Genome Network Project Core Group), The Transcriptional Landscape of the Mammalian Genome. Science. 2005;309(5740):1559-1563
All references(30)
Other
accession IDs
MGD-MRK-34039, MGI:106347

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory