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Tenm1
Gene Detail
Symbol

Name
ID
Tenm1
teneurin transmembrane protein 1
MGI:1345185
Synonyms
Odz1, TCAP-1, teneurin-1, Ten-m1
Feature Type
protein coding gene
Genetic Map
Chromosome X
23.21 cM, cytoband A2
Detailed Genetic Map ± 1 cM


Mapping data(2)
Sequence Map
ChrX:42527866-43429126 bp, - strand
From VEGA annotation of GRCm38

  901261 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:56542  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

HCOP human homology predictions: TENM1
Gene Tree: Tenm1

Human
homologs
TENM1, teneurin transmembrane protein 1
Orthology source: HomoloGene

IDs:
NCBI Gene ID: 10178
neXtProt AC: NX_Q9UKZ4

Human Synonyms: ODZ1, ODZ3, TEN-M1, TNM, TNM1

Human Chr (Location): Xq25; chrX:124375903-125204358 (-)  GRCh38.p2

Mutations,
alleles, and
phenotypes
All mutations/alleles(5) : Gene trapped(2) Targeted(3)
Incidental mutations (data from APF , CvDC )
Interactions
Tenm1 interacts with 514 markers (Mir1a-1, Mir1a-2, Mir1b, ...)
Gene Ontology
(GO)
classifications
Expression
Literature Summary: (4 records)
Data Summary: Results (145)    Tissues (137)    Images (25)    Tissue x Stage Matrix (view)
Assay TypeResults
Immunohistochemistry 5
RNA in situ 140
cDNA source data(7)
Other mouse links: Allen Institute   GEO   Expression Atlas
Other vertebrate links: Xenbase tenm1    NEW 
Molecular
reagents
All nucleic(13) cDNA(12) Primer pair(1)
Microarray probesets(5)
Other database
links
VEGA Gene Model OTTMUSG00000017325 (Evidence)
Ensembl Gene Model ENSMUSG00000016150 (Evidence)
Entrez Gene 23963 (Evidence)
UniGene 327698
DFCI TC1590821, TC1679835, TC1591978
Consensus CDS Project CCDS40953.1
International Mouse Phenotyping Consortium Status Tenm1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000017325 VEGA Gene Model | MGI Sequence Detail 901261 C57BL/6J ±  kb
transcript OTTMUST00000042144 VEGA | MGI Sequence Detail 12879 Not Applicable 
polypeptide OTTMUSP00000018946 VEGA | MGI Sequence Detail 2731 Not Applicable 

For the selected sequences
All sequences(44) RefSeq(12) UniProt(3)
Polymorphisms
SNPs within 2kb(1357 from dbSNP Build 137)    SNPs within 2kb including multiple locations(1359)
Protein-related
information
ResourceIDDescription
InterPro IPR013032 EGF-like, conserved site
InterPro IPR000742 Epidermal growth factor-like domain
InterPro IPR011042 Six-bladed beta-propeller, TolB-like
InterPro IPR009471 Teneurin intracellular, N-terminal
InterPro IPR006530 YD repeat
Protein Ontology PR:000011606 teneurin-1
References
(Earliest) J:54528 Oohashi T, et al., Mouse ten-m/Odz is a new family of dimeric type II transmembrane proteins expressed in many tissues. J Cell Biol. 1999 May 3;145(3):563-77
(Latest) J:196221 Chand D, et al., C-terminal processing of the teneurin proteins: independent actions of a teneurin C-terminal associated peptide in hippocampal cells. Mol Cell Neurosci. 2013 Jan;52:38-50
All references(36)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
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last database update
07/21/2015
MGI 5.22
The Jackson Laboratory