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C1ql1
Gene Detail
 Symbol
Name
ID
C1ql1
complement component 1, q subcomponent-like 1
MGI:1344400
Synonyms C1qrf
Feature Type protein coding gene
Genetic Map
Chromosome 11
66.48 cM, cytoband D
Detailed Genetic Map ± 1 cM


Mapping data(1)
Sequence Map
Chr11:102939264-102946688 bp, - strand
From VEGA annotation of GRCm38

  7425 bp   ±  kb flank

VEGA Genome Browser | Ensembl Genome Browser | UCSC Browser | NCBI Map Viewer


Mouse Genome Browser
Vertebrate
homology
HomoloGene:4867  Vertebrate Homology Class
1 human; 1 mouse; 1 rat; 1 chimpanzee; 1 rhesus macaque; 1 cattle; 1 dog; 1 chicken; 1 western clawed frog; 1 zebrafish

Gene Tree: C1ql1

Human
homologs
Human Homolog C1QL1, complement component 1, q subcomponent-like 1
NCBI Gene ID 10882
neXtProt AC  NX_O75973
Human Synonyms  C1QRF, C1QTNF14, CRF
Human Chr (Location)  17q21; chr17:44959693-44968276 (-)  GRCh38
Mutations,
alleles, and
phenotypes
All mutations/alleles(3) : Targeted(3)
Interactions
C1ql1 interacts with 99 markers (Mir9-1, Mir9-2, Mir9-3, ...)
Gene Ontology
(GO)
classifications
All GO classifications: (6 annotations)
Process biological_process
Component collagen trimer, cytoplasm, ...
Function protein binding
External Resources: FuncBase
Expression
Literature Summary: (1 records)
Data Summary: Results (47)    Tissues (36)   
Theiler Stages: 16, 20, 21, 22, 23, 24, 26, 27, 28
Assay TypeResults
RNA in situ 19
RT-PCR 28
cDNA source data(7)
External Resources: GEO   Expression Atlas
Molecular
reagents
All nucleic(10) cDNA(7) Primer pair(2) Other(1)
Microarray probesets(3)
Other database
links
VEGA Gene ModelOTTMUSG00000003099 (Evidence)
Ensembl Gene ModelENSMUSG00000045532 (Evidence)
Entrez Gene23829 (Evidence)
UniGene57154
DFCITC1614781
DoTSDT.40135398
NIA Mouse Gene IndexU033493
Consensus CDS ProjectCCDS25509.1
International Mouse Knockout Project StatusC1ql1
Sequences
Representative SequencesLengthStrain/SpeciesFlank
genomic OTTMUSG00000003099 VEGA Gene Model | MGI Sequence Detail 7425 C57BL/6J ±  kb
transcript OTTMUST00000006381 VEGA | MGI Sequence Detail 1473 Not Applicable 
polypeptide OTTMUSP00000003003 VEGA | MGI Sequence Detail 258 Not Applicable 

For the selected sequences
All sequences(18) RefSeq(2) UniProt(3)
Polymorphisms SNPs within 2kb(61 from dbSNP Build 137)
Protein-related
information
ResourceIDDescription
InterPro IPR008160 Collagen triple helix repeat
InterPro IPR001073 Complement C1q protein
InterPro IPR008983 Tumour necrosis factor-like domain
Protein Ontology PR:000004879 C1q-related factor
References (Earliest) J:51998 Berube NG, et al., Cloning and characterization of CRF, a novel C1q-related factor, expressed in areas of the brain involved in motor function. Brain Res Mol Brain Res. 1999 Jan 8;63(2):233-40
(Latest) J:203503 Wei Z, et al., C1q/tumor necrosis factor-related protein 11 (CTRP11), a novel adipose stroma-derived regulator of adipogenesis. J Biol Chem. 2013 Apr 12;288(15):10214-29
All references(30)

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Tumor Biology (MTB), Gene Ontology (GO), MouseCyc
Citing These Resources
Funding Information
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last database update
09/09/2014
MGI 5.19
The Jackson Laboratory